RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 CDH9Q9ULB4 789 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-204ENST00000622179 F5H5T6 163 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 F8W8V4 182 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 TSPAN3O60637 253 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 DAB1O75553 588 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 CCNB1P14635 433 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 OR1E1P30953 314 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 TBL3Q12788 808 aaKnown RBP13.53□□□□□ -0.24
SIRPA-204ENST00000622179 PPM1JQ5JR12 505 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 MRNIPQ6NTE8 343 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 TDRPQ86YL5 185 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 TOP6BLQ8N6T0 577 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 PCSK9Q8NBP7 692 aaKnown RBP13.53□□□□□ -0.24
SIRPA-204ENST00000622179 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 NMUR2Q9GZQ4 415 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 PLLPQ9Y342 182 aa13.53□□□□□ -0.24
SIRPA-204ENST00000622179 RENBPP51606 427 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 CTBP1Q13363 440 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 CYLC2Q14093 348 aaPredicted RBP13.52□□□□□ -0.24
SIRPA-204ENST00000622179 MPP2Q14168 576 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 GPR152Q8TDT2 470 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 SOCS4Q8WXH5 440 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 OMDQ99983 421 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 BCO2Q9BYV7 579 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 IL22Q9GZX6 179 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 PRDM5Q9NQX1 630 aaPredicted RBP13.52□□□□□ -0.24
SIRPA-204ENST00000622179 SNX10Q9Y5X0 201 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 MYBPHLA2RUH7 354 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 TRPC5OSA6NMA1 111 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 PIGNO95427 931 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 ALDH7A1P49419 539 aaKnown RBP13.52□□□□□ -0.24
SIRPA-204ENST00000622179 CLCNKBP51801 687 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.24
SIRPA-204ENST00000622179 GPX6P59796 221 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.24
SIRPA-204ENST00000622179 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 IZUMO2Q6UXV1 221 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 C10orf107Q8IVU9 208 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 NCLNQ969V3 563 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 VAT1Q99536 393 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 ZBTB18Q99592 522 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 BRD8Q9H0E9 1235 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 CDHR5Q9HBB8 845 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 DTLQ9NZJ0 730 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 CD274Q9NZQ7 290 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 MPP6Q9NZW5 540 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 SCN7AQ01118 1682 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 ARAP2Q8WZ64 1704 aa13.52□□□□□ -0.24
SIRPA-204ENST00000622179 GLTPD2A6NH11 291 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 RAMP2O60895 175 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 RECQLP46063 649 aaPredicted RBP13.52□□□□□ -0.25
SIRPA-204ENST00000622179 RAB27AP51159 221 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 ESRRGP62508 458 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 GPR63Q9BZJ6 419 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 EFCAB1Q9HAE3 211 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 CNGB3Q9NQW8 809 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 CRYL1Q9Y2S2 319 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 STX7O15400 261 aaKnown RBP13.52□□□□□ -0.25
SIRPA-204ENST00000622179 MSI1O43347 362 aaKnown RBP13.52□□□□□ -0.25
SIRPA-204ENST00000622179 AKAP10O43572 662 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 TPST1O60507 370 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 HDAC4P56524 1084 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 MAXP61244 160 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 MRPS35P82673 323 aaKnown RBP13.52□□□□□ -0.25
SIRPA-204ENST00000622179 TRMT5Q32P41 509 aaKnown RBP13.52□□□□□ -0.25
SIRPA-204ENST00000622179 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 GIPC2Q8TF65 315 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 TRIM15Q9C019 465 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 CHKBQ9Y259 395 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 PCDHB5Q9Y5E4 795 aa13.52□□□□□ -0.25
SIRPA-204ENST00000622179 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 CBX4O00257 560 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 KRT36O76013 467 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 EDN1P05305 212 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 PTPN9P43378 593 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 USP4Q13107 963 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 PREPLQ4J6C6 727 aaPredicted RBP13.51□□□□□ -0.25
SIRPA-204ENST00000622179 C6orf10Q5SRN2 563 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SLC41A1Q8IVJ1 513 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 LRRC43Q8N309 656 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SERPINB11Q96P15 392 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SNX15Q9NRS6 342 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 ABCC13Q9NSE7 274 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 COL22A1Q8NFW1 1626 aaPredicted RBP13.51□□□□□ -0.25
SIRPA-204ENST00000622179 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SRP72O76094 671 aaKnown RBP13.51□□□□□ -0.25
SIRPA-204ENST00000622179 ALDH2P05091 517 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 OR4Q2P0C623 313 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SLC11A2P49281 568 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 ABCE1P61221 599 aaKnown RBP13.51□□□□□ -0.25
SIRPA-204ENST00000622179 SLC34A1Q06495 639 aa13.51□□□□□ -0.25
SIRPA-204ENST00000622179 ZNF177Q13360 481 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms