RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FAM110DQ8TAY7 271 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-229ENST00000621897 OIT3Q8WWZ8 545 aa4.87□□□□□ -1.63
BRCA1-229ENST00000621897 KATNAL1Q9BW62 490 aa4.87□□□□□ -1.63
BRCA1-229ENST00000621897 WDR12Q9GZL7 423 aaKnown RBP4.87□□□□□ -1.63
BRCA1-229ENST00000621897 MYLK2Q9H1R3 596 aa4.87□□□□□ -1.63
BRCA1-229ENST00000621897 SEPSECSQ9HD40 501 aaKnown RBP4.87□□□□□ -1.63
BRCA1-229ENST00000621897 DAPP1Q9UN19 280 aa4.87□□□□□ -1.63
BRCA1-229ENST00000621897 DTX4Q9Y2E6 619 aa4.87□□□□□ -1.63
BRCA1-229ENST00000621897 PCDHA10Q9Y5I2 948 aa4.87□□□□□ -1.63
BRCA1-229ENST00000621897 SPTLC2O15270 562 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 RCAN1P53805 252 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 RHAGQ02094 409 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 WASHC2DQ5SRD0 308 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 MORC1Q86VD1 984 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 RSC1A1Q92681 617 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 MIB2Q96AX9 1013 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 EID2BQ96D98 161 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 URB1-AS1Q96HZ7 61 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 THOC3Q96J01 351 aaKnown RBP4.86□□□□□ -1.63
BRCA1-229ENST00000621897 ZPBPQ9BS86 351 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 RTKNQ9BST9 563 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 HDHD5Q9BXW7 423 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 ISCUQ9H1K1 167 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 TASP1Q9H6P5 420 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 LIN7CQ9NUP9 197 aaKnown RBP4.86□□□□□ -1.63
BRCA1-229ENST00000621897 ARL15Q9NXU5 204 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 RCE1Q9Y256 329 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 PKP3Q9Y446 797 aa4.86□□□□□ -1.63
BRCA1-229ENST00000621897 RPS10-NUDT3A0A1W2PQS6 291 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 TCRBV7S3A2A0A539 114 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 LACTBL1A8MY62 500 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 NGFRP08138 427 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 CYP21A2P08686 494 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 GALNTL6Q49A17 601 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 ALG10Q5BKT4 473 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 ALG10BQ5I7T1 473 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 ERAP2Q6P179 960 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 SLC30A9Q6PML9 568 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 PARM1Q6UWI2 310 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 TOGARAM2Q6ZUX3 1019 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 TMEM200AQ86VY9 491 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 CCDC25Q86WR0 208 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 KLBQ86Z14 1044 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 ATG16L2Q8NAA4 619 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 C7orf57Q8NEG2 295 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 SCAMP5Q8TAC9 235 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-229ENST00000621897 ARHGAP39Q9C0H5 1083 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 PNRC2Q9NPJ4 139 aaKnown RBP4.85□□□□□ -1.63
BRCA1-229ENST00000621897 TBC1D14Q9P2M4 693 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 NOTCH4Q99466 2003 aa4.85□□□□□ -1.63
BRCA1-229ENST00000621897 GRM8O00222 908 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 SYT5O00445 386 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 ACTL6BO94805 426 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 ITGA2BP08514 1039 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 SETSIPP0DME0 302 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 PRPH2P23942 346 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 CDC25AP30304 524 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 SERPINF1P36955 418 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 RFX2P48378 723 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 POLE2P56282 527 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 TNFAIP2Q03169 654 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 ZACNQ401N2 412 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 ZNF585BQ52M93 769 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 Q5PR19 223 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 TTC22Q5TAA0 569 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 PGBD2Q6P3X8 592 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 NFRKBQ6P4R8 1299 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 CCDC146Q8IYE0 955 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 SLC25A41Q8N5S1 370 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 KDM1BQ8NB78 822 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 NPAS1Q99742 590 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 CRB3Q9BUF7 120 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 PDE11AQ9HCR9 933 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 PCDHA7Q9UN72 937 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 LRCH1Q9Y2L9 728 aa4.84□□□□□ -1.63
BRCA1-229ENST00000621897 TRBV5-7A0A0A0MS05 114 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 ABHD14A-ACY1A0A1B0GW23 586 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 BECN2A8MW95 431 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 ACKR2O00590 384 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 SLC28A2O43868 658 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 SKAP2O75563 359 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-229ENST00000621897 KLKB1P03952 638 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 LCKP06239 509 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 T-ENOLP0DO92 83 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 LYL1P12980 280 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 CHRNA5P30532 468 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 STAT1P42224 750 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 TRAF1Q13077 416 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 PUM3Q15397 648 aaKnown RBP4.83□□□□□ -1.64
BRCA1-229ENST00000621897 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-229ENST00000621897 SLC16A12Q6ZSM3 486 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 RNF144BQ7Z419 303 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 ANKS1BQ7Z6G8 1248 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 SLC44A2Q8IWA5 706 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-229ENST00000621897 FBXL14Q8N1E6 418 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 ENGASEQ8NFI3 743 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 CMASQ8NFW8 434 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms