RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 KNL1Q8NG31 2342 aa18.51■□□□□ 0.55
SCAMP4-213ENST00000621748 PCNX2A6NKB5 2137 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 METTL12A8MUP2 240 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 F9P00740 461 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 ADRB1P08588 477 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 MMP8P22894 467 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 ACSL1P33121 698 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 STK19P49842 368 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 PLK1P53350 603 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 FANCCQ00597 558 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 ZBTB16Q05516 673 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 MTA1Q13330 715 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 SLC12A1Q13621 1099 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 ARID5BQ14865 1188 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 UAP1L1Q3KQV9 507 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 C5orf22Q49AR2 442 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 WDR45BQ5MNZ6 344 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 BRMS1LQ5PSV4 323 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 C9orf64Q5T6V5 341 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 DCAF12L1Q5VU92 463 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 DAB2IPQ5VWQ8 1189 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 PHLDB2Q86SQ0 1253 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 MSANTD4Q8NCY6 345 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 SLC30A5Q8TAD4 765 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 ALG14Q96F25 216 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 PCDHB18PQ96TA0 734 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 RBSNQ9H1K0 784 aa18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 RSPH9Q9H1X1 276 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-213ENST00000621748 CNTN5O94779 1100 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 KCNK5O95279 499 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 DNTTP04053 509 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 GFPT1Q06210 699 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 ZNF776Q68DI1 518 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 SND1Q7KZF4 910 aaKnown RBP eCLIP18.49■□□□□ 0.551e-7■■□□□ 11.5
SCAMP4-213ENST00000621748 ARCQ7LC44 396 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 BNIPLQ7Z465 357 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 RABEPKQ7Z6M1 372 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 ZNF683Q8IZ20 524 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 EMC1Q8N766 993 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 CFAP57Q96MR6 1250 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 GTPBP2Q9BX10 602 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 DOCK4Q8N1I0 1966 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 ITIH6Q6UXX5 1313 aa18.49■□□□□ 0.55
SCAMP4-213ENST00000621748 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 TARSL2A2RTX5 802 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 MEI4A8MW99 385 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 ARHGAP33O14559 1287 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 GIPC1O14908 333 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 TEX33O43247 280 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 UNGP13051 313 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 PTP4A2Q12974 167 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 ZNF177Q13360 481 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 ALFQ53S48 1182 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 ARTNQ5T4W7 220 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 N4BP2L1Q5TBK1 243 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 RNF219Q5W0B1 726 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 OR2I1PQ8NGU4 316 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 PTPRN2Q92932 1015 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 FAM129BQ96TA1 746 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 C11orf70Q9BRQ4 267 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 FEM1AQ9BSK4 669 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 C6orf106Q9H6K1 298 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 METTL5Q9NRN9 209 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 TBC1D30Q9Y2I9 924 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 OR51B4Q9Y5P0 310 aa18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 TPRP12270 2363 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 NYNRINQ9P2P1 1898 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-213ENST00000621748 EDDM13A0A1B0GTR0 161 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 GOLGA6L3A6NEY3 463 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 CLDN11O75508 207 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 GJB6O95452 261 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 GNSP15586 552 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 CDH4P55283 916 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 OXCT1P55809 520 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 SULT2A1Q06520 285 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 RAB6CQ53S08 254 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 PSAPL1Q6NUJ1 521 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 TRIM72Q6ZMU5 477 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 C1orf74Q96LT6 269 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 TRIM5Q9C035 493 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 BTBD1Q9H0C5 482 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 RAB6CQ9H0N0 254 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 MIR1-1HGQ9H1L0 117 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 PABPC3Q9H361 631 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 IFNKQ9P0W0 207 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 SUSD2Q9UGT4 822 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 EIF2B4Q9UI10 523 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 PAXBP1Q9Y5B6 917 aa18.47■□□□□ 0.55
SCAMP4-213ENST00000621748 DRGXA6NNA5 263 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 MID1O15344 667 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 RNASEH1O60930 286 aaKnown RBP18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 ENDOD1O94919 500 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 VAV1P15498 845 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 RDXP35241 583 aaKnown RBP18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 ATXN3P54252 364 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 ATP11AP98196 1134 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 CST6Q15828 149 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 TTC31Q49AM3 519 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 SH3PXD2AQ5TCZ1 1133 aa18.46■□□□□ 0.55
SCAMP4-213ENST00000621748 FAM131BQ86XD5 332 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms