RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PLK1P53350 603 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 JAM2P57087 298 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 BNC1Q01954 994 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 DEUP1Q05D60 604 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 SLC12A1Q13621 1099 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 STX1AQ16623 288 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 RNF219Q5W0B1 726 aaPredicted RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 MMAAQ8IVH4 418 aaKnown RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 STK40Q8N2I9 435 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 GANCQ8TET4 914 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 FAM129BQ96TA1 746 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 PCED1AQ9H1Q7 454 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 WDCPQ9H6R7 721 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 DNAAF2Q9NVR5 837 aaKnown RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 LIMA1Q9UHB6 759 aaKnown RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 ANGPTL2Q9UKU9 493 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 STAP1Q9ULZ2 295 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 CACNA1EQ15878 2313 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.67■□□□□ 0.42
HMGN3-203ENST00000620514 TARSL2A2RTX5 802 aaKnown RBP17.67■□□□□ 0.42
HMGN3-203ENST00000620514 MID1O15344 667 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 RNASEH1O60930 286 aaKnown RBP17.67■□□□□ 0.42
HMGN3-203ENST00000620514 GJB3O75712 270 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 FSBPO95073 299 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 CD59P13987 128 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 SOX5P35711 763 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 FMO1Q01740 532 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 CDR2Q01850 454 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 MYL5Q02045 173 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 ZNF177Q13360 481 aaPredicted RBP17.67■□□□□ 0.42
HMGN3-203ENST00000620514 SYCP1Q15431 976 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 CST6Q15828 149 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 SLC25A52Q3SY17 297 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 C5orf22Q49AR2 442 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 ALFQ53S48 1182 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 BRMS1LQ5PSV4 323 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 PHLDB2Q86SQ0 1253 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 PTPRN2Q92932 1015 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 PGAP3Q96FM1 320 aaPredicted RBP17.67■□□□□ 0.42
HMGN3-203ENST00000620514 HSD3B7Q9H2F3 369 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 SGK2Q9HBY8 427 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 FBXL12Q9NXK8 326 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 TMEM59LQ9UK28 342 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 OR51B4Q9Y5P0 310 aa17.67■□□□□ 0.42
HMGN3-203ENST00000620514 SPAARA0A1B0GVQ0 90 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 A0A1W2PP55 124 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 LGALS16A8MUM7 142 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 UPK3BL1B0FP48 263 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 UPK3BL2E5RIL1 263 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 TOP3BO95985 862 aaKnown RBP17.66■□□□□ 0.42
HMGN3-203ENST00000620514 F9P00740 461 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 CYP1A1P04798 512 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-203ENST00000620514 PSMD8P48556 350 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 OXCT1P55809 520 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 FOXC1Q12948 553 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 MTA1Q13330 715 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 NCAPHQ15003 741 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 CCDC183Q5T5S1 534 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 USP30Q70CQ3 517 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 SND1Q7KZF4 910 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGN3-203ENST00000620514 ZNF677Q86XU0 584 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 ZNF683Q8IZ20 524 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 EMC1Q8N766 993 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 MSANTD4Q8NCY6 345 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 FRS2Q8WU20 508 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 BIRC7Q96CA5 298 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 CFAP57Q96MR6 1250 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 SPAG5Q96R06 1193 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 FEM1AQ9BSK4 669 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 SLC32A1Q9H598 525 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 IL21RQ9HBE5 538 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 METTL5Q9NRN9 209 aaKnown RBP17.66■□□□□ 0.42
HMGN3-203ENST00000620514 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 ACACBO00763 2458 aa17.66■□□□□ 0.42
HMGN3-203ENST00000620514 A0A1B0GVT2 93 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 FAM47DPA6NHR8 397 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 CLDN11O75508 207 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 RNASEH2AO75792 299 aaKnown RBP17.65■□□□□ 0.42
HMGN3-203ENST00000620514 MBD3O95983 291 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 ZNF18P17022 549 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 SLC8A1P32418 973 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 STAT1P42224 750 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 CSNK1EP49674 416 aaKnown RBP17.65■□□□□ 0.42
HMGN3-203ENST00000620514 CDH4P55283 916 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 FAM193AP78312 1265 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 SHC2P98077 582 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 SULT2A1Q06520 285 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 RAB6CQ53S08 254 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 ARTNQ5T4W7 220 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 LAYNQ6UX15 382 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 BNIPLQ7Z465 357 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 SLC30A5Q8TAD4 765 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 PCMTD1Q96MG8 357 aaPredicted RBP17.65■□□□□ 0.42
HMGN3-203ENST00000620514 CAMK1GQ96NX5 476 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 PCDHB18PQ96TA0 734 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 ORAI3Q9BRQ5 295 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 ZDHHC5Q9C0B5 715 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms