RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 FAM114A1Q8IWE2 563 aa22.76■■□□□ 1.23
SRRT-218ENST00000620394 CFAP52Q8N1V2 620 aa22.76■■□□□ 1.23
SRRT-218ENST00000620394 CRELD1Q96HD1 420 aa22.76■■□□□ 1.23
SRRT-218ENST00000620394 BTBD1Q9H0C5 482 aa22.76■■□□□ 1.23
SRRT-218ENST00000620394 SCML1Q9UN30 329 aa22.76■■□□□ 1.23
SRRT-218ENST00000620394 SHROOM3Q8TF72 1996 aa22.76■■□□□ 1.23
SRRT-218ENST00000620394 PLXNA2O75051 1894 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 SLC2A3P11169 496 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 CD27P26842 260 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 ERCC5P28715 1186 aaPredicted RBP22.75■■□□□ 1.23
SRRT-218ENST00000620394 ST8SIA6P61647 398 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 PTK2Q05397 1052 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 CCDC157Q569K6 752 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 EFHC1Q5JVL4 640 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 MIIPQ5JXC2 388 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 TTC39BQ5VTQ0 682 aaPredicted RBP22.75■■□□□ 1.23
SRRT-218ENST00000620394 DHRS13Q6UX07 377 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 USP30Q70CQ3 517 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 TMPRSS12Q86WS5 348 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 PASD1Q8IV76 773 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 DEFB106AQ8N104 65 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 ATP6V0D2Q8N8Y2 350 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 C1orf131Q8NDD1 294 aaKnown RBP22.75■■□□□ 1.23
SRRT-218ENST00000620394 BIRC7Q96CA5 298 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 DCBLD2Q96PD2 775 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 NOX5Q96PH1 765 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 PABPC3Q9H361 631 aaKnown RBP22.75■■□□□ 1.23
SRRT-218ENST00000620394 MTG2Q9H4K7 406 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 FAM204AQ9H8W3 233 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 SGK2Q9HBY8 427 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 DNAJC12Q9UKB3 198 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 ERVW-1Q9UQF0 538 aa22.75■■□□□ 1.23
SRRT-218ENST00000620394 F5H5T6 163 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 TK2O00142 265 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 DFNA5O60443 496 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 SIN3BO75182 1162 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 MOCS3O95396 460 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 CLCN1P35523 988 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 HNF1BP35680 557 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 CDK17Q00537 523 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 C19orf57Q0VDD7 668 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 PTPN20Q4JDL3 420 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 LAYNQ6UX15 382 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 C11orf57Q6ZUT1 292 aaPredicted RBP22.74■■□□□ 1.23
SRRT-218ENST00000620394 FAM183BPQ6ZVS7 135 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 SLC26A9Q7LBE3 791 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 ADAT2Q7Z6V5 191 aaKnown RBP22.74■■□□□ 1.23
SRRT-218ENST00000620394 FAM71AQ8IYT1 594 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 NDST4Q9H3R1 872 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 DDIT4Q9NX09 232 aa22.74■■□□□ 1.23
SRRT-218ENST00000620394 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
SRRT-218ENST00000620394 C10orf142B7Z368 130 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 H0Y8X5 98 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 DAB1O75553 588 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 ERBB2P04626 1255 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 CCR1P32246 355 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 CTSOP43234 321 aaPredicted RBP22.73■■□□□ 1.23
SRRT-218ENST00000620394 CTSKP43235 329 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 MTA1Q13330 715 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 SLC12A1Q13621 1099 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 TPD52L1Q16890 204 aaPredicted RBP22.73■■□□□ 1.23
SRRT-218ENST00000620394 VWA3BQ502W6 1294 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 C9orf64Q5T6V5 341 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 SLC47A2Q86VL8 602 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 ZNF397Q8NF99 534 aaPredicted RBP22.73■■□□□ 1.23
SRRT-218ENST00000620394 PIP4K2CQ8TBX8 421 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 PCDHGA1Q9Y5H4 931 aa22.73■■□□□ 1.23
SRRT-218ENST00000620394 EDDM13A0A1B0GTR0 161 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 A0A1B0GVM2 712 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 TCAF2A6NFQ2 919 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 FOXN3O00409 490 aaPredicted RBP22.72■■□□□ 1.23
SRRT-218ENST00000620394 FSBPO95073 299 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 PNMA6AP0CW24 399 aaPredicted RBP22.72■■□□□ 1.23
SRRT-218ENST00000620394 PRKCSHP14314 528 aaPredicted RBP22.72■■□□□ 1.23
SRRT-218ENST00000620394 ABCB4P21439 1286 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 CDH5P33151 784 aaPredicted RBP22.72■■□□□ 1.23
SRRT-218ENST00000620394 ECT2LQ008S8 904 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 C6orf118Q5T5N4 469 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 OTUD1Q5VV17 481 aaPredicted RBP22.72■■□□□ 1.23
SRRT-218ENST00000620394 APCDD1Q8J025 514 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 CCAR2Q8N163 923 aaKnown RBP22.72■■□□□ 1.23
SRRT-218ENST00000620394 COL26A1Q96A83 441 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 ORAI3Q9BRQ5 295 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 TUBGCP2Q9BSJ2 902 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 SLC12A6Q9UHW9 1150 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 DACH1Q9UI36 760 aa22.72■■□□□ 1.23
SRRT-218ENST00000620394 PLK4O00444 970 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 CDK4P11802 303 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 KRT9P35527 623 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 VASPP50552 380 aaPredicted RBP22.71■■□□□ 1.23
SRRT-218ENST00000620394 PLK1P53350 603 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 C21orf59P57076 290 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 SNX16P57768 344 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 IL9RQ01113 521 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 SLC6A3Q01959 620 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 CST6Q15828 149 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 RABGAP1LQ5R372 815 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 CXorf57Q6NSI4 855 aaKnown RBP22.71■■□□□ 1.23
SRRT-218ENST00000620394 ZDHHC17Q8IUH5 632 aa22.71■■□□□ 1.23
SRRT-218ENST00000620394 DHX40Q8IX18 779 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms