RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ERP29P30040 261 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 ZNF544Q6NX49 715 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 HM13Q8TCT9 377 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 ACCSQ96QU6 501 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 NOL11Q9H8H0 719 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 CYP39A1Q9NYL5 469 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 CLDN25C9JDP6 229 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 POLRMTO00411 1230 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 DLGAP3O95886 979 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 CYP1A2P05177 515 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 HARS2P49590 506 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 PRKG2Q13237 762 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 HIF1AQ16665 826 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 XKRXQ6PP77 449 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 ZCCHC23Q6ZST2 131 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 WDTC1Q8N5D0 677 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 PTPRN2Q92932 1015 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 GLMNQ92990 594 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 CHCHD6Q9BRQ6 235 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 HOXC10Q9NYD6 342 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 A0A0G2JPF8 293 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 HNRNPCL3B7ZW38 293 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 MEIS2O14770 477 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 HNRNPCL4P0DMR1 293 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 TBXAS1P24557 533 aaPredicted RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 PSMD4P55036 377 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 CYP4F8P98187 520 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 DLG1Q12959 904 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 GPATCH4Q5T3I0 446 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 LRIF1Q5T3J3 769 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 PPM1KQ8N3J5 372 aa3.14□□□□□ -1.91
NEB-220ENST00000618972 GPATCH1Q9BRR8 931 aaKnown RBP3.14□□□□□ -1.91
NEB-220ENST00000618972 SOAT2O75908 522 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 UNC5CO95185 931 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ACAP2Q15057 778 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 C11orf74Q86VG3 221 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 LURAP1LQ8IV03 231 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RNASE11Q8TAA1 199 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 ANO3Q9BYT9 981 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PIF1Q9H611 641 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SELENONQ9NZV5 590 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FAM135AQ9P2D6 1515 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KNTC1P50748 2209 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FLT1P17948 1338 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TRIM64CA6NLI5 447 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SPDYE16A6NNV3 312 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 PTGES3LE9PB15 166 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CDH6P55285 790 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 VAC14Q08AM6 782 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 GPRC6AQ5T6X5 926 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KLHL17Q6TDP4 642 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TRIM67Q6ZTA4 783 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SIX5Q8N196 739 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DEPDC4Q8N2C3 294 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 IRF2BPLQ9H1B7 796 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 IL1RL2Q9HB29 575 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CLN6Q9NWW5 311 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 IFT52Q9Y366 437 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ZNF318Q5VUA4 2279 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TTC34A8MYJ7 566 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RNF103O00237 685 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RIPK2O43353 540 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PSTPIP1O43586 416 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DDAH1O94760 285 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 HAUS5O94927 633 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CDK18Q07002 472 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 UBAP2LQ14157 1087 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 OTOAQ7RTW8 1153 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SLC22A9Q8IVM8 553 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RHBDF1Q96CC6 855 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MIR1-1HGQ9H1L0 117 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CHKBQ9Y259 395 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 GABBR2O75899 941 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SERPINA6P08185 405 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 COL6A1P12109 1028 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RTP1P59025 263 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SLC27A3Q5K4L6 730 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RAB43Q86YS6 212 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MIPEPQ99797 713 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 STRA6Q9BX79 667 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PRKAG3Q9UGI9 489 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PCDHA3Q9Y5H8 950 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PEX16Q9Y5Y5 336 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ALOX15BO15296 676 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CD53P19397 219 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CRABP2P29373 138 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ALDH3A2P51648 485 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ZNF135P52742 658 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 ANKRD34AQ69YU3 496 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ASAP3Q8TDY4 903 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CEP295NLQ96MC4 621 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 C11orf70Q9BRQ4 267 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MTMR12Q9C0I1 747 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DHX33Q9H6R0 707 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 RSAD1Q9HA92 442 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CD163L1Q9NR16 1453 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TSPAN1O60635 241 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PSMA2P25787 234 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 IL1R2P27930 398 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NCF4Q15080 339 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms