RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	TKTL2	Q9H0I9	626 aa		11.47	□□□□□ -0.57
TP53-223	ENST00000618944	WDCP	Q9H6R7	721 aa		11.47	□□□□□ -0.57
TP53-223	ENST00000618944	SNX15	Q9NRS6	342 aa		11.47	□□□□□ -0.57
TP53-223	ENST00000618944	ST3GAL5	Q9UNP4	418 aa		11.47	□□□□□ -0.57
TP53-223	ENST00000618944	RPL26L1	Q9UNX3	145 aa	Known RBP	11.47	□□□□□ -0.57
TP53-223	ENST00000618944	SERPINA6	P08185	405 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	RALB	P11234	206 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	CPT1A	P50416	773 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	IRF9	Q00978	393 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	SPANXN3	Q5MJ09	141 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	GRTP1	Q5TC63	336 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	FSTL4	Q6MZW2	842 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	MAVS	Q7Z434	540 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	SCUBE1	Q8IWY4	988 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
TP53-223	ENST00000618944	AGR3	Q8TD06	166 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	MICAL1	Q8TDZ2	1067 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	DNAJC9	Q8WXX5	260 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	NAT9	Q9BTE0	207 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	COLEC11	Q9BWP8	271 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.46	□□□□□ -0.57
TP53-223	ENST00000618944	LRRC40	Q9H9A6	602 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	BFAR	Q9NZS9	450 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	COPG2	Q9UBF2	871 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	STOML1	Q9UBI4	398 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	OR12D3	Q9UGF7	316 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	WASF2	Q9Y6W5	498 aa		11.46	□□□□□ -0.57
TP53-223	ENST00000618944	AP2A1	O95782	977 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	LTF	P02788	710 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	SERPINE1	P05121	402 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	TH	P07101	528 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	CPA3	P15088	417 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	NFKB1	P19838	968 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	GARS	P41250	739 aa	Known RBP	11.46	□□□□□ -0.58
TP53-223	ENST00000618944	SLC25A3	Q00325	362 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	ANKRD20A4	Q4UJ75	823 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	MORN1	Q5T089	497 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	PDZD4	Q76G19	769 aa	Predicted RBP	11.46	□□□□□ -0.58
TP53-223	ENST00000618944	OTOP3	Q7RTS5	596 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	SLC25A41	Q8N5S1	370 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	PPP4R1	Q8TF05	950 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	SH3TC2	Q8TF17	1288 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	HASPIN	Q8TF76	798 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	SORT1	Q99523	831 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	CPNE1	Q99829	537 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	MLPH	Q9BV36	600 aa	Predicted RBP	11.46	□□□□□ -0.58
TP53-223	ENST00000618944	SIK2	Q9H0K1	926 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.46	□□□□□ -0.58
TP53-223	ENST00000618944	NMRK1	Q9NWW6	199 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	APOBEC2	Q9Y235	224 aa	Known RBP	11.46	□□□□□ -0.58
TP53-223	ENST00000618944	CDY2A	Q9Y6F7	541 aa		11.46	□□□□□ -0.58
TP53-223	ENST00000618944	ZCWPW2	A0A1B0GU75	182 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	MYADML2	A6NDP7	307 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	CHRM1	P11229	460 aa	Predicted RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	NCF2	P19878	526 aa	Predicted RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	IDH3A	P50213	366 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SCNN1G	P51170	649 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SLC34A1	Q06495	639 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	USP4	Q13107	963 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	TUBB3	Q13509	450 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	ARL13B	Q3SXY8	428 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	STXBP5	Q5T5C0	1151 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	FAM91A1	Q658Y4	838 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	RWDD4	Q6NW29	188 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	ARHGAP24	Q8N264	748 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SCG3	Q8WXD2	468 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	MAN1C1	Q9NR34	630 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	BATF3	Q9NR55	127 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	IARS2	Q9NSE4	1012 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	CPSF2	Q9P2I0	782 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944		A0A096LPK6	155 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	LOC100653049	A0A140TA62	436 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	ARHGAP42	A6NI28	874 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	NVL	O15381	856 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	KRT34	O76011	436 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	LRIG2	O94898	1065 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	FBXO21	O94952	628 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	CELF2	O95319	508 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	BDNF	P23560	247 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SPR	P35270	261 aa	Predicted RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	LHX1	P48742	406 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	ABCE1	P61221	599 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	PPID	Q08752	370 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SEMA3B	Q13214	749 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	PEX6	Q13608	980 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	FSCN1	Q16658	493 aa	Known RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	NAPRT	Q6XQN6	538 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	ULK2	Q8IYT8	1036 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	CFAP61	Q8NHU2	1237 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SLC9A7	Q96T83	725 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	RBBP8	Q99708	897 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.45	□□□□□ -0.58
TP53-223	ENST00000618944	PRDM16	Q9HAZ2	1276 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	CNGB3	Q9NQW8	809 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	FAM105A	Q9NUU6	356 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	PLA2G4C	Q9UP65	541 aa		11.45	□□□□□ -0.58
TP53-223	ENST00000618944	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
TP53-223	ENST00000618944	IQCA1L	A6NCM1	817 aa		11.44	□□□□□ -0.58
TP53-223	ENST00000618944	ARL5C	A6NH57	179 aa		11.44	□□□□□ -0.58
TP53-223	ENST00000618944	HHLA1	C9JL84	531 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms