RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SCUBE2Q9NQ36 999 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RHBDL2Q9NX52 303 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 MORF4L1Q9UBU8 362 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TRMT6Q9UJA5 497 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 TNPO3Q9Y5L0 923 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 GRIN2DO15399 1336 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 WNK2Q9Y3S1 2297 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PRSS47A8MTI9 375 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PLA2G6O60733 806 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SMNDC1O75940 238 aaKnown RBP eCLIP3.11□□□□□ -1.91
LPP-221ENST00000618621 NPTXRO95502 500 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ANXA6P08133 673 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ATP5F1P24539 256 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 CHI3L1P36222 383 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 NUDT2P50583 147 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SQLEQ14534 574 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 IL31Q6EBC2 164 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NPAS4Q8IUM7 802 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 USP33Q8TEY7 942 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 UCMAQ8WVF2 138 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RMND5BQ96G75 393 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 PCDHB18PQ96TA0 734 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CDV3Q9UKY7 258 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 CLTCL1P53675 1640 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SETBP1Q9Y6X0 1596 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 C1orf232A0A0U1RR37 186 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PDE9AO76083 593 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ETS1P14921 441 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SMIM11AP58511 58 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 HYIQ5T013 277 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PLEKHA7Q6IQ23 1121 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ZDHHC24Q6UX98 284 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ULK2Q8IYT8 1036 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ATP6V0D2Q8N8Y2 350 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 OR56A4Q8NGH8 313 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PYDC1Q8WXC3 89 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 MYDGFQ969H8 173 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SKA1Q96BD8 255 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PDGFCQ9NRA1 345 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SNX13Q9Y5W8 968 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 COPG1Q9Y678 874 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 KDM6AO15550 1401 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 PRPF4O43172 522 aaKnown RBP eCLIP3.11□□□□□ -1.91
LPP-221ENST00000618621 BAIAP3O94812 1187 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 EGFRP00533 1210 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 KRT6AP02538 564 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 KRT6BP04259 564 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 KRT6CP48668 564 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NEK3P51956 506 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 MTM1Q13496 603 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SLC1A5Q15758 541 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 DDR2Q16832 855 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SV2CQ496J9 727 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NEPROQ6NW34 567 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 KCNT2Q6UVM3 1135 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NUDT18Q6ZVK8 323 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 AFG1LQ8WV93 481 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 EBNA1BP2Q99848 306 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 RTKNQ9BST9 563 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 HGH1Q9BTY7 390 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ADAM30Q9UKF2 790 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PRR23AA6NEV1 266 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 APOC4-APOC2K7ER74 178 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PMM2O15305 246 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 STX7O15400 261 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 APOC2P02655 101 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 EIF2S1P05198 315 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 ERVK-10P10266 1014 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 BACE1P56817 501 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SLC6A3Q01959 620 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ARSJQ5FYB0 599 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 DEPDC1Q5TB30 811 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PDPK2PQ6A1A2 396 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RIPOR1Q6ZS17 1223 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 IFNEQ86WN2 208 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 C10orf107Q8IVU9 208 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 STKLD1Q8NE28 680 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SMPDL3BQ92485 455 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 AKT1S1Q96B36 256 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CACNA1FO60840 1977 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ALDH1A1P00352 501 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CYP1A1P04798 512 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 MLNP12872 115 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NFYCQ13952 458 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TLDC1Q6P9B6 456 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ECHDC2Q86YB7 292 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PLEKHA8Q96JA3 519 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 WWOXQ9NZC7 414 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 INVSQ9Y283 1065 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CCDC154A6NI56 674 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SPATA31C2B4DYI2 1134 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 H0YC42 278 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ACKR2O00590 384 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RECQL5O94762 991 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 TPH1P17752 444 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CCNG1P51959 295 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TP53BP2Q13625 1128 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 DLK2Q6UY11 383 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 OTULINQ96BN8 352 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PPP1R14BQ96C90 147 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms