RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 RCOR3Q9P2K3 495 aaPredicted RBP20.85■□□□□ 0.93
NEK3-208ENST00000618534 KCNK1O00180 336 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 AIM2O14862 343 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 CREB3O43889 395 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 GLDCP23378 1020 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 ACAT1P24752 427 aaKnown RBP20.85■□□□□ 0.93
NEK3-208ENST00000618534 SCNN1AP37088 669 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 NUDT2P50583 147 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 PPM1LQ5SGD2 360 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 POTEAQ6S8J7 498 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 PID1Q7Z2X4 250 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 UNC93AQ86WB7 457 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 NAT14Q8WUY8 206 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 PPP1R36Q96LQ0 422 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 BTBD9Q96Q07 612 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 VCX3AQ9NNX9 186 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 SNTG2Q9NY99 539 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 C15orf38-AP3S2A0A0A6YYH1 394 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 FZD9O00144 591 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 MATKP42679 507 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 PDK1Q15118 436 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 OTUD1Q5VV17 481 aaPredicted RBP20.84■□□□□ 0.93
NEK3-208ENST00000618534 ARPINQ7Z6K5 226 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 CLEC14AQ86T13 490 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 PQLC1Q8N2U9 271 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.84■□□□□ 0.93
NEK3-208ENST00000618534 FAM149B1Q96BN6 582 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 FERMT1Q9BQL6 677 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 WDR55Q9H6Y2 383 aaPredicted RBP20.84■□□□□ 0.93
NEK3-208ENST00000618534 LRRC40Q9H9A6 602 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 IGSF9Q9P2J2 1179 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 COMMD3-BMI1R4GMX3 469 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 DNAJC25-GNG10A0A024R161 153 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 TMEM114B3SHH9 223 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 NEMP1O14524 444 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 MPSTP25325 297 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 LMO2P25791 158 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 PIK3R1P27986 724 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 NUMBP49757 651 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 SNAPC2Q13487 334 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 TTLL4Q14679 1199 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 TLR1Q15399 786 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 TMC7Q7Z402 723 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 SNX32Q86XE0 403 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 ACVR1CQ8NER5 493 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 DCUN1D1Q96GG9 259 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 GATA5Q9BWX5 397 aaPredicted RBP20.84■□□□□ 0.93
NEK3-208ENST00000618534 STK39Q9UEW8 545 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 PSMD13Q9UNM6 376 aa20.84■□□□□ 0.93
NEK3-208ENST00000618534 TRIM13O60858 407 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 OR6B1O95007 311 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 CHRNGP07510 517 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 ZNF286BP0CG31 522 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 RPL34P49207 117 aaKnown RBP20.83■□□□□ 0.93
NEK3-208ENST00000618534 RPL26P61254 145 aaKnown RBP20.83■□□□□ 0.93
NEK3-208ENST00000618534 Q3C1V9 767 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 SLC25A52Q3SY17 297 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 METTL21CQ5VZV1 264 aa20.83■□□□□ 0.93
NEK3-208ENST00000618534 KLHL8Q9P2G9 620 aaPredicted RBP20.83■□□□□ 0.93
NEK3-208ENST00000618534 G3BP2Q9UN86 482 aaKnown RBP20.83■□□□□ 0.93
NEK3-208ENST00000618534 MAGED2Q9UNF1 606 aaPredicted RBP20.83■□□□□ 0.93
NEK3-208ENST00000618534 KPNA7A9QM74 516 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 FBXO21O94952 628 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 PGM3O95394 542 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 SMIM18P0DKX4 95 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 CCR10P46092 362 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 ARHGAP1Q07960 439 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 KCTD2Q14681 263 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 HSP90AA5PQ58FG0 334 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 URGCPQ8TCY9 931 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 SLC2A14Q8TDB8 520 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 KBTBD7Q8WVZ9 684 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 NMRAL1Q9HBL8 299 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 GJD2Q9UKL4 321 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 VANGL2Q9ULK5 521 aa20.83■□□□□ 0.92
NEK3-208ENST00000618534 ZCWPW2A0A1B0GU75 182 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 SLC25A27O95847 323 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 C2P06681 752 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 LSAMPQ13449 338 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 DCAF6Q58WW2 860 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 ISLR2Q6UXK2 745 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 SNX27Q96L92 541 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 NDNQ99608 321 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 HES2Q9Y543 173 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 MPOP05164 745 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 SPATA31D3P0C874 917 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 THOP1P52888 689 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 ZNF618Q5T7W0 954 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 SPATA31D4Q6ZUB0 917 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 TMEM135Q86UB9 458 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 LRRC52Q8N7C0 313 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 MFSD3Q96ES6 412 aa20.82■□□□□ 0.92
NEK3-208ENST00000618534 C6orf203Q9P0P8 240 aaPredicted RBP20.82■□□□□ 0.92
NEK3-208ENST00000618534 AP1G1O43747 822 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 THRAP10827 490 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 ACADSBP45954 432 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 ADIGQ0VDE8 80 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 ITGA7Q13683 1181 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 LAMB3Q13751 1172 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 ZNF772Q68DY9 489 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms