RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PSKH1P11801 424 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 ADD2P35612 726 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 AMPD2Q01433 879 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 STRIP1Q5VSL9 837 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 FAM220AQ7Z4H9 259 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 PARP8Q8N3A8 854 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 PEX16Q9Y5Y5 336 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 CES2O00748 559 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 PDPK1O15530 556 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 SLC38A2Q96QD8 506 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 FAM50BQ9Y247 325 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 TBC1D30Q9Y2I9 924 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 UHRF1BP1LA0JNW5 1464 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 CPSF4O95639 269 aaKnown RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 CDK9P50750 372 aaKnown RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 FBXO31Q5XUX0 539 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 NIPAL1Q6NVV3 410 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF614Q8N883 585 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 POF1BQ8WVV4 589 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 C12orf43Q96C57 262 aaKnown RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 MIEF1Q9NQG6 463 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 TBCCD1Q9NVR7 557 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 A0A1W2PP64 1363 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 EIF5AP63241 154 aaKnown RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF446Q9NWS9 450 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 LCP1P13796 627 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 PHKA2P46019 1235 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 UBXN2AP68543 259 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 SEMA3AQ14563 771 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 ZBTB6Q15916 424 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 OSBP2Q969R2 916 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 CRELD1Q96HD1 420 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 TCF12Q99081 682 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 CCDC177Q9NQR7 707 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 ITGA2BP08514 1039 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
COL5A1-208ENST00000618395 GADL1Q6ZQY3 521 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 MSANTD3Q96H12 275 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 SEMA4AQ9H3S1 761 aa15.28■□□□□ 0.04
COL5A1-208ENST00000618395 DHRS12A0PJE2 317 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 REM1O75628 298 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 KCNH1O95259 989 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 TNFRSF8P28908 595 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 SULT1E1P49888 294 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.04
COL5A1-208ENST00000618395 GLRA4Q5JXX5 417 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 C11orf96Q7Z7L8 435 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 FAM160B2Q86V87 743 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 PCDH19Q8TAB3 1148 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 MED15Q96RN5 788 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 UQCC2Q9BRT2 126 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 RARBP10826 455 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 IFI35P80217 286 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-208ENST00000618395 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 ARHGAP28Q9P2N2 729 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 TFR2Q9UP52 801 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 SCAF8Q9UPN6 1271 aaKnown RBP15.27■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF3P17036 446 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 ERGIC2Q96RQ1 377 aa15.27■□□□□ 0.04
COL5A1-208ENST00000618395 DENND3A2RUS2 1198 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 SERPINA3P01011 423 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 PFKFB3Q16875 520 aaPredicted RBP15.27■□□□□ 0.03
COL5A1-208ENST00000618395 ZFAND2BQ8WV99 257 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.03
COL5A1-208ENST00000618395 SYNDIG1Q9H7V2 258 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 GJB4Q9NTQ9 266 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.27■□□□□ 0.03
COL5A1-208ENST00000618395 RAB23Q9ULC3 237 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 SYNMO15061 1565 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 HAUS6Q7Z4H7 955 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 HM13Q8TCT9 377 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 ING5Q8WYH8 240 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 IP6K1Q92551 441 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 KLHL5Q96PQ7 755 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 SPON2Q9BUD6 331 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 UNKQ9C0B0 810 aaKnown RBP15.27■□□□□ 0.03
COL5A1-208ENST00000618395 PRPF19Q9UMS4 504 aaKnown RBP15.27■□□□□ 0.03
COL5A1-208ENST00000618395 ANKRD6Q9Y2G4 727 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 IRGMA1A4Y4 181 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 PRKACBP22694 351 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 STOMP27105 288 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 RAB5BP61020 215 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 MRNIPQ6NTE8 343 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 CD302Q8IX05 232 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 DAW1Q8N136 415 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.03
COL5A1-208ENST00000618395 TSPOAP1O95153 1857 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 ANXA9O76027 345 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 UBE2SQ16763 222 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 TTMPQ5BVD1 217 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 TCEAL5Q5H9L2 206 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 XKRXQ6PP77 449 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 GALNT12Q8IXK2 581 aa15.27■□□□□ 0.03
COL5A1-208ENST00000618395 LRFN2Q9ULH4 789 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms