RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 C11orf70Q9BRQ4 267 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 EPS8L2Q9H6S3 715 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TRMT13Q9NUP7 481 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TRMT112Q9UI30 125 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHGA10Q9Y5H3 936 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PIK3C2AO00443 1686 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 MAGEB16A2A368 324 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 HEATR9A2RTY3 570 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 NDUFS2O75306 463 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CLIC3O95833 236 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PSKH1P11801 424 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CD247P20963 164 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TYK2P29597 1187 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ADSSP30520 456 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 UQCRC1P31930 480 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ABCG1P45844 678 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 APOFQ13790 326 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 EPHA7Q15375 998 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 C2CD6Q53TS8 623 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ERAP2Q6P179 960 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 KIAA0408Q6ZU52 694 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TDRPQ86YL5 185 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FAM178BQ8IXR5 827 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 DSELQ8IZU8 1212 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 LEMD2Q8NC56 503 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FBXO22Q8NEZ5 403 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ABHD11Q8NFV4 315 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 RORBQ92753 470 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PEX13Q92968 403 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 NXNL1Q96CM4 212 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ADI1Q9BV57 179 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 MROQ9BYG7 248 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FANCFQ9NPI8 374 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PRDM11Q9NQV5 511 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TMEM9Q9P0T7 183 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 KANSL3Q9P2N6 904 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 KLQ9UEF7 1012 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 RGPD8O14715 1765 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 FAM149AA5PLN7 773 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 KPNA7A9QM74 516 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 AKAP3O75969 853 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SRP72O76094 671 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 YES1P07947 543 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 GLRA2P23416 452 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 GPX6P59796 221 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 STILQ15468 1287 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 MGAT5BQ3V5L5 792 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 PPP4R4Q6NUP7 873 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 DGLUCYQ7Z3D6 616 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 PIWIL3Q7Z3Z3 882 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CCNYL1Q8N7R7 359 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 FAM71DQ8N9W8 422 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 TMEM35BQ8NCS4 154 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 YME1L1Q96TA2 773 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 RTKNQ9BST9 563 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 C9orf16Q9BUW7 83 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 TDRD1Q9BXT4 1180 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 MRPL47Q9HD33 250 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SH3GLB2Q9NR46 395 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 PNPOQ9NVS9 261 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 TMEM260Q9NX78 707 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 PKD2L1Q9P0L9 805 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ALOX15BO15296 676 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 HDAC3O15379 428 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 GRIA3P42263 894 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 BNIP2Q12982 314 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 KLF10Q13118 480 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ALCAMQ13740 583 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 IKBKEQ14164 716 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CCDC85BQ15834 202 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 LSM12Q3MHD2 195 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SYCE2Q6PIF2 218 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CAND1Q86VP6 1230 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CHSY1Q86X52 802 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 DHFR2Q86XF0 187 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CHCHD4Q8N4Q1 142 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 PSD4Q8NDX1 1056 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 VTI1AQ96AJ9 217 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 VPS39Q96JC1 886 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 MMP19Q99542 508 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CNPY3Q9BT09 278 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 NUAK2Q9H093 628 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ELOVL6Q9H5J4 265 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 TRAF6Q9Y4K3 522 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 FSCN2O14926 492 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 STX7O15400 261 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 GH2P01242 217 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 RALBP11234 206 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 AOC1P19801 751 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ELK3P41970 407 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 OXA1LQ15070 435 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CA9Q16790 459 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms