RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 STKLD1Q8NE28 680 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 PRSS33Q8NF86 280 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 ITFG1Q8TB96 612 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 SLC7A14Q8TBB6 771 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 PROKR1Q8TCW9 393 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 THAP3Q8WTV1 239 aaPredicted RBP4.95□□□□□ -1.62
CUL3-216ENST00000617432 ING5Q8WYH8 240 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 RSPH1Q8WYR4 309 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 SMG7Q92540 1137 aaKnown RBP4.95□□□□□ -1.62
CUL3-216ENST00000617432 CBWD1Q9BRT8 395 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 RPP25Q9BUL9 199 aaKnown RBP4.95□□□□□ -1.62
CUL3-216ENST00000617432 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 STRA6Q9BX79 667 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 C1QTNF1Q9BXJ1 281 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 PCIF1Q9H4Z3 704 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 IPPKQ9H8X2 491 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 MTRRQ9UBK8 725 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 CPSF3Q9UKF6 684 aaKnown RBP4.95□□□□□ -1.62
CUL3-216ENST00000617432 ODF2LQ9ULJ1 636 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 FAM50BQ9Y247 325 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 R3HCC1Q9Y3T6 440 aaKnown RBP4.95□□□□□ -1.62
CUL3-216ENST00000617432 DOCK6Q96HP0 2047 aa4.95□□□□□ -1.62
CUL3-216ENST00000617432 CITO14578 2027 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 NOTCH4Q99466 2003 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 FRMD3A2A2Y4 597 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 TMEM189-UBE2V1I3L0A0 370 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 CLDN3O15551 220 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 B3GALT2O43825 422 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 TBC1D4O60343 1298 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 GCNT3O95395 438 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 BMP15O95972 392 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 ALADP13716 330 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 GJA1P17302 382 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 CCR2P41597 374 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 MTHFRP42898 656 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 GTF2BQ00403 316 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 ITIH3Q06033 890 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 RIN1Q13671 783 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 ZBTB6Q15916 424 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 ATAT1Q5SQI0 421 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 CES5AQ6NT32 575 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 DCLRE1AQ6PJP8 1040 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 CCDC149Q6ZUS6 474 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 ZNF720Q7Z2F6 126 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 NLGN4XQ8N0W4 816 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 ZNF276Q8N554 614 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 OR10T2Q8NGX3 314 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 WDR48Q8TAF3 677 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.94□□□□□ -1.62
CUL3-216ENST00000617432 NOC3LQ8WTT2 800 aaKnown RBP4.94□□□□□ -1.62
CUL3-216ENST00000617432 TCEAL4Q96EI5 215 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 RIPOR3Q96MK2 946 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 PGLYRP2Q96PD5 576 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 RTP3Q9BQQ7 232 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 MSTO1Q9BUK6 570 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 TIPINQ9BVW5 301 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 C17orf75Q9HAS0 396 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 KCND2Q9NZV8 630 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 FNIP2Q9P278 1114 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 LARSQ9P2J5 1176 aaKnown RBP4.94□□□□□ -1.62
CUL3-216ENST00000617432 DNMT3BQ9UBC3 853 aaKnown RBP4.94□□□□□ -1.62
CUL3-216ENST00000617432 FBXL5Q9UKA1 691 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 PCDHA7Q9UN72 937 aa4.94□□□□□ -1.62
CUL3-216ENST00000617432 TRIOO75962 3097 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 OGTO15294 1046 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 POLR2DO15514 142 aaKnown RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 PI15O43692 258 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 FAM20BO75063 409 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 MOSPD3O75425 235 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 YEATS4O95619 227 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 ADRB2P07550 413 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 CLTAP09496 248 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 CEBPBP17676 345 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 PTPN1P18031 435 aaKnown RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 LRPAP1P30533 357 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 CLK3P49761 638 aaKnown RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 IL13RA1P78552 427 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 CUL4BQ13620 913 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 RAB33AQ14088 237 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 CTXN3Q4LDR2 81 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 RABL3Q5HYI8 236 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 PPM1LQ5SGD2 360 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 C9orf57Q5W0N0 161 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 ADALQ6DHV7 355 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 PARM1Q6UWI2 310 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 NELFCDQ8IXH7 590 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 TMEM105Q8N8V8 129 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 CMASQ8NFW8 434 aaPredicted RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 FGF14Q92915 247 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 MRRFQ96E11 262 aaKnown RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 UROC1Q96N76 676 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 NECTIN4Q96NY8 510 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 KXD1Q9BQD3 176 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 FAM213AQ9BRX8 229 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 AARSD1Q9BTE6 412 aaKnown RBP4.93□□□□□ -1.62
CUL3-216ENST00000617432 PLA2G2FQ9BZM2 168 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 TRIM9Q9C026 710 aa4.93□□□□□ -1.62
CUL3-216ENST00000617432 GOLPH3LQ9H4A5 285 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms