RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OSTNP61366 133 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 MPZL3Q6UWV2 235 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CEP70Q8NHQ1 597 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 MECRQ9BV79 373 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 SH3PXD2BA1X283 911 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 MAGEA10P43363 369 aaPredicted RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 PSMD7P51665 324 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 MYBPC1Q00872 1141 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 PLOD1Q02809 727 aaPredicted RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 C2CD6Q53TS8 623 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 RALGPS1Q5JS13 557 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 TWF2Q6IBS0 349 aaKnown RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 PIWIL2Q8TC59 973 aaKnown RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 MRPL1Q9BYD6 325 aaKnown RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 TMEM165Q9HC07 324 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 PTPRHQ9HD43 1115 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 TNFSF13BQ9Y275 285 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 AP4B1Q9Y6B7 739 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 EXTL3O43909 919 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 PIAS1O75925 651 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 KRT38O76015 456 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 CALCAP01258 141 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 C1QAP02745 245 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 CAPNS1P04632 268 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 SRGAP2BP0DMP2 458 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 PORP16435 677 aaPredicted RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 OTUD4Q01804 1114 aaKnown RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 CES4AQ5XG92 561 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 NOTUMQ6P988 496 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 TICAM1Q8IUC6 712 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 THNSL1Q8IYQ7 743 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 ACTL9Q8TC94 416 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 TOPORSQ9NS56 1045 aaPredicted RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 RSL24D1Q9UHA3 163 aaKnown RBP22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 HES2Q9Y543 173 aa22.45■■□□□ 1.18
POLR2J3-220ENST00000613744 TANC1Q9C0D5 1861 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 RFPL1O75677 317 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 PROCP04070 461 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 ITGAXP20702 1163 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 MMP8P22894 467 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 TNFSF9P41273 254 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 CDK9P50750 372 aaKnown RBP22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 YWHAGP61981 247 aaKnown RBP eCLIP22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 TAZQ16635 292 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 TRIM67Q6ZTA4 783 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 BADQ92934 168 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 SLX1AQ9BQ83 275 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 EBF4Q9BQW3 602 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 CDT1Q9H211 546 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 CNTN6Q9UQ52 1028 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 SQORQ9Y6N5 450 aa22.44■■□□□ 1.18
POLR2J3-220ENST00000613744 ACRP10323 421 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 KITP10721 976 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 ACO1P21399 889 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PROZP22891 400 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PRKCHP24723 683 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 GDF10P55107 478 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PACS1Q6VY07 963 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 VWCEQ96DN2 955 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 ADAM2Q99965 735 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 CNOT11Q9UKZ1 510 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 BARX2Q9UMQ3 279 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PRPF19Q9UMS4 504 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 TCRBV7S3A2A0A539 114 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 KANSL1LA0AUZ9 987 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 C3orf70A6NLC5 250 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 SIN3BO75182 1162 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 CAPN15O75808 1086 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PDE5AO76074 875 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 ALOX15P16050 662 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 GNA15P30679 374 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 COG7P83436 770 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 ZNF252P-AS1Q0IIN9 211 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 ADGRE1Q14246 886 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PCBP1Q15365 356 aaKnown RBP eCLIP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 PATL1Q86TB9 770 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 IGDCC3Q8IVU1 814 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 TMEM192Q8IY95 271 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 VPS50Q96JG6 964 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 LRGUKQ96M69 825 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 APOL6Q9BWW8 343 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 RBAKQ9NYW8 714 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 MARCOQ9UEW3 520 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 ARHGAP26Q9UNA1 814 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 TTLL3Q9Y4R7 772 aa22.43■■□□□ 1.18
POLR2J3-220ENST00000613744 TCRBV5S1A1TA0A578 114 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 CHADO15335 359 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 TCF4P15884 667 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 VARSP26640 1264 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 PCSK6P29122 969 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 CLDN10P78369 228 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 UBXN11Q5T124 520 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 LRRC8BQ6P9F7 803 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 SLC27A1Q6PCB7 646 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 RTN4RL1Q86UN2 441 aaPredicted RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 DEFB107AQ8IZN7 70 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 SHKBP1Q8TBC3 707 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 ADPGKQ9BRR6 497 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 FAF1Q9UNN5 650 aaPredicted RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 H0YJX3 145 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms