RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 TMEM74BQ9NUR3 256 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 KIAA1522Q9P206 1035 aaPredicted RBP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 PLA2G4CQ9UP65 541 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 NEU3Q9UQ49 428 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
CSTF1-208ENST00000613138 PLK4O00444 970 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 MAP3K13O43283 966 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 TIMM44O43615 452 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 CAVIN2O95810 425 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 MT-CO1P00395 513 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 F9P00740 461 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 ITPKAP23677 461 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 ADRA1BP35368 520 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 MPLP40238 635 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 PTPN9P43378 593 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 MAMLD1Q13495 774 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 CAMK2GQ13555 558 aaPredicted RBP13.03□□□□□ -0.32
CSTF1-208ENST00000613138 STARD3Q14849 445 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 FIGNQ5HY92 759 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 LINGO4Q6UY18 593 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 ARCQ7LC44 396 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 ARFGAP1Q8N6T3 406 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 RMDN1Q96DB5 314 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 FEM1AQ9BSK4 669 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSTF1-208ENST00000613138 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
CSTF1-208ENST00000613138 MYO1AQ9UBC5 1043 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 CAPN11Q9UMQ6 739 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 SLCO1B1Q9Y6L6 691 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 PLXNA2O75051 1894 aa13.03□□□□□ -0.32
CSTF1-208ENST00000613138 TP53BP1Q12888 1972 aaPredicted RBP13.03□□□□□ -0.32
CSTF1-208ENST00000613138 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.32
CSTF1-208ENST00000613138 IGLV3-10A0A075B6K4 115 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 A0A087X0T9 212 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 A0A1W2PQJ5 194 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 DRGXA6NNA5 263 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 K7ERQ8 282 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 RNF103O00237 685 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ZBTB24O43167 697 aaPredicted RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 FOXD2O60548 495 aaPredicted RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 RHOCP08134 193 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 FAM228BP0C875 321 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 TCF4P15884 667 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 MAOBP27338 520 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 TPMTP51580 245 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 CDH4P55283 916 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 RPS14P62263 151 aaKnown RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ZBED6P86452 979 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ECT2LQ008S8 904 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 RPL6Q02878 288 aaKnown RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ELF2Q15723 593 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 C9orf64Q5T6V5 341 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 MANEALQ5VSG8 457 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 SCYL2Q6P3W7 929 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 DCUN1D2Q6PH85 259 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 PRR23CQ6ZRP0 262 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 GAS2L3Q86XJ1 694 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 DRC7Q8IY82 874 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 STK40Q8N2I9 435 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 NETO2Q8NC67 525 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 OR2T3Q8NH03 318 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 PIGKQ92643 395 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 BTBD6Q96KE9 485 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 SPACA7Q96KW9 195 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 HAPLN3Q96S86 360 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 EDEM3Q9BZQ6 932 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 USP36Q9P275 1121 aaKnown RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
CSTF1-208ENST00000613138 SERGEFQ9UGK8 458 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
CSTF1-208ENST00000613138 CACNA1EQ15878 2313 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 SMAD6O43541 496 aaKnown RBP13.01□□□□□ -0.33
CSTF1-208ENST00000613138 CLDN11O75508 207 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 RHOBTB1O94844 696 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 LRIG2O94898 1065 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 SDHBP21912 280 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 ACVRL1P37023 503 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 ZNF143P52747 638 aaPredicted RBP13.01□□□□□ -0.33
CSTF1-208ENST00000613138 CA9Q16790 459 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 RSPO4Q2I0M5 234 aaPredicted RBP13.01□□□□□ -0.33
CSTF1-208ENST00000613138 HNRNPA1L2Q32P51 320 aaKnown RBP13.01□□□□□ -0.33
CSTF1-208ENST00000613138 POM121L1PQ3SYA9 428 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 LEKR1Q6ZMV7 388 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 STRADAQ7RTN6 431 aa13.01□□□□□ -0.33
CSTF1-208ENST00000613138 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms