RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 GUSBP11Q6P575 273 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 RFWD3Q6PCD5 774 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 TRIM69Q86WT6 500 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 MFN1Q8IWA4 741 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 TPCN2Q8NHX9 752 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
SSX3-204ENST00000612497 TWNKQ96RR1 684 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 DUSP16Q9BY84 665 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 KDM4CQ9H3R0 1056 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 SFMBT1Q9UHJ3 866 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 STOML2Q9UJZ1 356 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 ERVW-1Q9UQF0 538 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 CEP83Q9Y592 693 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 PLRG1O43660 514 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 TCEA3O75764 348 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 SRPRAP08240 638 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 PRLRP16471 622 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 TXLNAP40222 546 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 METAP1P53582 386 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 CYP4F2P78329 520 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 ELAVL3Q14576 367 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 CLCA4Q14CN2 919 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 NCAPHQ15003 741 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 MPP7Q5T2T1 576 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 PIK3R6Q5UE93 754 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 RNF219Q5W0B1 726 aaPredicted RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 ZCCHC8Q6NZY4 707 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 ZNF557Q8N988 423 aaPredicted RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 KDM1BQ8NB78 822 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 RNF139Q8WU17 664 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 KLK6Q92876 244 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 LMLNQ96KR4 655 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 NT5C1AQ9BXI3 368 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 OLA1Q9NTK5 396 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 DNAJC28Q9NX36 388 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 NCKIPSDQ9NZQ3 722 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 SEPT10Q9P0V9 454 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 SLCO3A1Q9UIG8 710 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 INTS6Q9UL03 887 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 HBS1LQ9Y450 684 aaKnown RBP10.65□□□□□ -0.7
SSX3-204ENST00000612497 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
SSX3-204ENST00000612497 LRRK1Q38SD2 2015 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 GOLGA6L7A0A1B0GV03 622 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 PLD2O14939 933 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 SLC7A4O43246 635 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 TGFB1I1O43294 461 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 RNGTTO60942 597 aaKnown RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 KRT38O76015 456 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 VNN1O95497 513 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 LATS1O95835 1130 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 C4BPAP04003 597 aaKnown RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 AP3M2P53677 418 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 HNRNPKP61978 463 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSX3-204ENST00000612497 ECT2LQ008S8 904 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 PPP1R26Q5T8A7 1209 aaPredicted RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 SPOPLQ6IQ16 392 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 DSG4Q86SJ6 1040 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 VASH2Q86V25 355 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 FBXO39Q8N4B4 442 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 CARNMT1Q8N4J0 409 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 TMEM145Q8NBT3 493 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 OR13H1Q8NG92 308 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 FIBINQ8TAL6 211 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 NDRG1Q92597 394 aaKnown RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 PTPRN2Q92932 1015 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 LIN37Q96GY3 246 aaPredicted RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 RPL10LQ96L21 214 aaKnown RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 PANK2Q9BZ23 570 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 PLEKHB1Q9UF11 243 aaPredicted RBP10.64□□□□□ -0.71
SSX3-204ENST00000612497 PCDHGA7Q9Y5G6 932 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 CENPEQ02224 2701 aa10.64□□□□□ -0.71
SSX3-204ENST00000612497 ITIH6Q6UXX5 1313 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 TYW5A2RUC4 315 aaKnown RBP10.63□□□□□ -0.71
SSX3-204ENST00000612497 EME2A4GXA9 379 aaPredicted RBP10.63□□□□□ -0.71
SSX3-204ENST00000612497 LRRIQ3A6PVS8 624 aaPredicted RBP10.63□□□□□ -0.71
SSX3-204ENST00000612497 MUSKO15146 869 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 EIF3DO15371 548 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSX3-204ENST00000612497 IRAK2O43187 625 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 MSI1O43347 362 aaKnown RBP10.63□□□□□ -0.71
SSX3-204ENST00000612497 EXOC3O60645 756 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 MOCS3O95396 460 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 RPN1P04843 607 aaKnown RBP10.63□□□□□ -0.71
SSX3-204ENST00000612497 LIPCP11150 499 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 VAV1P15498 845 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 SLC6A4P31645 630 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 NNMTP40261 264 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 CASRP41180 1078 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 STAT6P42226 847 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 ASPAP45381 313 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 CLDN2P57739 230 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 CNTN1Q12860 1018 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 CDH18Q13634 790 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 MORC3Q14149 939 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 SPIDRQ14159 915 aa10.63□□□□□ -0.71
SSX3-204ENST00000612497 DRAP1Q14919 205 aaPredicted RBP10.63□□□□□ -0.71
SSX3-204ENST00000612497 NR0B2Q15466 257 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms