RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	PLK4	O00444	970 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	YKT6	O15498	198 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	SART1	O43290	800 aa	Known RBP	21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	SMC2	O95347	1197 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	MOCS3	O95396	460 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	MOCS2	O96007	188 aa	Predicted RBP	21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	ADH1B	P00325	375 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	EPHA8	P29322	1005 aa	Predicted RBP	21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	RXRG	P48443	463 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	PSMD8	P48556	350 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	ACADVL	P49748	655 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	STK19	P49842	368 aa	Predicted RBP	21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	PLK1	P53350	603 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	NXPH1	P58417	271 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	DNAJC3	Q13217	504 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	ZC3H12A	Q5D1E8	599 aa	Known RBP	21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	SFMBT2	Q5VUG0	894 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	RAP1GAP2	Q684P5	730 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	TTI2	Q6NXR4	508 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	FOXR2	Q6PJQ5	311 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	EHBP1	Q8NDI1	1231 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	FRS2	Q8WU20	508 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	SMARCE1	Q969G3	411 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	FAM149B1	Q96BN6	582 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	CNDP2	Q96KP4	475 aa	Known RBP	21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	BTN2A3P	Q96KV6	586 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	ERVMER34-1	Q9H9K5	563 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	AASDHPPT	Q9NRN7	309 aa		21.71	■■□□□ 1.07
NECAB3-222	ENST00000607805	TLR4	O00206	839 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	LDOC1	O95751	146 aa	Predicted RBP	21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	CDK4	P11802	303 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	ABCB4	P21439	1286 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	MZF1	P28698	734 aa	Predicted RBP	21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	ACADSB	P45954	432 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	VASP	P50552	380 aa	Predicted RBP	21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	CLDN6	P56747	220 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	PPP2CB	P62714	309 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	PPP2CA	P67775	309 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	PITX1	P78337	314 aa	Predicted RBP	21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	SLC12A1	Q13621	1099 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	ELAVL3	Q14576	367 aa	Known RBP	21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	DENND1B	Q6P3S1	775 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	TMEM110	Q86TL2	294 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	CCDC117	Q8IWD4	279 aa	Predicted RBP	21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	TIGD1	Q96MW7	591 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	GDF3	Q9NR23	364 aa		21.7	■■□□□ 1.06
NECAB3-222	ENST00000607805	COL6A6	A6NMZ7	2263 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	ZNF462	Q96JM2	2506 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	PSMA7	O14818	248 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	RFPL3	O75679	317 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	TRUB2	O95900	331 aa	Known RBP	21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	ITGAV	P06756	1048 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	VAV1	P15498	845 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	METAP1	P53582	386 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	BNIP3	Q12983	259 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	FBXL19	Q6PCT2	694 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	SPATS2	Q86XZ4	545 aa	Known RBP	21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	OR14C36	Q8NHC7	312 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	ALG14	Q96F25	216 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	SERAC1	Q96JX3	654 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	POPDC2	Q9HBU9	364 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	ST7	Q9NRC1	585 aa		21.69	■■□□□ 1.06
NECAB3-222	ENST00000607805	CHD5	Q8TDI0	1954 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	KCNU1	A8MYU2	1149 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	APOE	P02649	317 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	BMP6	P22004	513 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	CETN1	Q12798	172 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	CCDC40	Q4G0X9	1142 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	NAPEPLD	Q6IQ20	393 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	CXorf57	Q6NSI4	855 aa	Known RBP	21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	CHSY1	Q86X52	802 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	TRIM59	Q8IWR1	403 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	CCAR2	Q8N163	923 aa	Known RBP	21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	EID2	Q8N6I1	236 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	MFSD2A	Q8NA29	543 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	TRIM62	Q9BVG3	475 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	KDM4C	Q9H3R0	1056 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	SARDH	Q9UL12	918 aa		21.68	■■□□□ 1.06
NECAB3-222	ENST00000607805	PPP1R3G	B7ZBB8	358 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805		E5RJQ4	531 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	TLX3	O43711	291 aa	Predicted RBP	21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	IL1B	P01584	269 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	JUP	P14923	745 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	HNF1B	P35680	557 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	ARRB1	P49407	418 aa	Predicted RBP	21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	MARS	P56192	900 aa	Known RBP	21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	YWHAZ	P63104	245 aa	Known RBP	21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	SULT2A1	Q06520	285 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	KCNH2	Q12809	1159 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	RNF219	Q5W0B1	726 aa	Predicted RBP	21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	IQCH	Q86VS3	1027 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	ELOA2	Q8IYF1	753 aa	Predicted RBP	21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	ZNF606	Q8WXB4	792 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	NXPE2	Q96DL1	559 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	SPAG5	Q96R06	1193 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	THAP9	Q9H5L6	903 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	21.67	■■□□□ 1.06	2e-7	■■■□□ 16.5
NECAB3-222	ENST00000607805	TJP2	Q9UDY2	1190 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	MAN1B1	Q9UKM7	699 aa		21.67	■■□□□ 1.06
NECAB3-222	ENST00000607805	CEP83	Q9Y592	693 aa		21.67	■■□□□ 1.06

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms