RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 DDIT4Q9NX09 232 aa7.86□□□□□ -1.15
CUX1-219ENST00000606749 COX16Q9P0S2 106 aa7.86□□□□□ -1.15
CUX1-219ENST00000606749 ADAMTS1Q9UHI8 967 aa7.86□□□□□ -1.15
CUX1-219ENST00000606749 AJAP1Q9UKB5 411 aaPredicted RBP7.86□□□□□ -1.15
CUX1-219ENST00000606749 FZD4Q9ULV1 537 aa7.86□□□□□ -1.15
CUX1-219ENST00000606749 APOBEC2Q9Y235 224 aaKnown RBP7.86□□□□□ -1.15
CUX1-219ENST00000606749 CEP83Q9Y592 693 aa7.86□□□□□ -1.15
CUX1-219ENST00000606749 DMXL2Q8TDJ6 3036 aa7.86□□□□□ -1.15
CUX1-219ENST00000606749 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 A0A1B0GVM2 712 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 TCAF2A6NFQ2 919 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 LRRC72A6NJI9 287 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 SRRM3A6NNA2 597 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 H0Y8X5 98 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 M0QYT0 321 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 TAF4O00268 1085 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 VILLO15195 856 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 FLRT2O43155 660 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 PCDHGA12O60330 932 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 DFNA5O60443 496 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 RNASEH2AO75792 299 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 DKK1O94907 266 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ADH1BP00325 375 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 IL1BP01584 269 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ATXN1LP0C7T5 689 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 PNMA6AP0CW24 399 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 C5AR1P21730 350 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 NOS2P35228 1153 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 CTSKP43235 329 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 PSMD8P48556 350 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 NUMBP49757 651 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 STK19P49842 368 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 VASPP50552 380 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 IRAK1P51617 712 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 OXCT1P55809 520 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 BPIFB4P59827 614 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 KCNMA1Q12791 1236 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 NME3Q13232 169 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 MTA1Q13330 715 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ZNF177Q13360 481 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 MAN2A1Q16706 1144 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 TPD52L1Q16890 204 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 C5orf22Q49AR2 442 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 PTPN20Q4JDL3 420 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 MIIPQ5JXC2 388 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 RABGAP1LQ5R372 815 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 TTC39BQ5VTQ0 682 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 CXorf57Q6NSI4 855 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 CCNI2Q6ZMN8 369 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 SND1Q7KZF4 910 aaKnown RBP eCLIP7.85□□□□□ -1.15
CUX1-219ENST00000606749 SLC26A9Q7LBE3 791 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ADAT2Q7Z6V5 191 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 C14orf80Q86SX3 495 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 AADATQ8N5Z0 425 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 C1orf131Q8NDD1 294 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 ZNF397Q8NF99 534 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 OR52K2Q8NGK3 314 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 OR2T34Q8NGX1 318 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 OR14C36Q8NHC7 312 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 FRS2Q8WU20 508 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ZCCHC14Q8WYQ9 949 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 RPRD1AQ96P16 312 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 NOX5Q96PH1 765 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 PPP1R9BQ96SB3 815 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 TUBGCP2Q9BSJ2 902 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 FEM1AQ9BSK4 669 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ACE2Q9BYF1 805 aaPredicted RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 NDST4Q9H3R1 872 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 PLCB1Q9NQ66 1216 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 TOR4AQ9NXH8 423 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 RALYQ9UKM9 306 aaKnown RBP7.85□□□□□ -1.15
CUX1-219ENST00000606749 VANGL2Q9ULK5 521 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 BTBD3Q9Y2F9 522 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 OR51B4Q9Y5P0 310 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 HS3ST4Q9Y661 456 aa7.85□□□□□ -1.15
CUX1-219ENST00000606749 ZZEF1O43149 2961 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ZFHX4Q86UP3 3567 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 KNL1Q8NG31 2342 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ASPMQ8IZT6 3477 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3DA0A087WVF3 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3IA0A087WXS9 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3EA0A087X179 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3KA0A087X1G2 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 A0A1B0GTQ1 180 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3FA6NER0 549 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3LB9A6J9 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 WNT9AO14904 365 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TNFSF14O43557 240 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ATP9BO43861 1147 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 PAGE1O75459 146 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 DAB1O75553 588 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ADCY5O95622 1261 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 WNT1P04628 370 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3HP0C7X1 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 PRKCSHP14314 528 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 CYP11B1P15538 503 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 ERCC5P28715 1186 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 CDH5P33151 784 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms