RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 OPHN1O60890 802 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 CCNCP24863 283 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 OR1E1P30953 314 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 IRAK1P51617 712 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 CDH4P55283 916 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 DHX9Q08211 1270 aaKnown RBP18.45■□□□□ 0.54
VRK3-225ENST00000601912 SLMAPQ14BN4 828 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 ANKRD20A2Q5SQ80 823 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 RNASEH2BQ5TBB1 312 aaKnown RBP18.45■□□□□ 0.54
VRK3-225ENST00000601912 ANKRD20A1Q5TYW2 823 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 ANKRD20A3Q5VUR7 823 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 TIGD7Q6NT04 549 aaPredicted RBP18.45■□□□□ 0.54
VRK3-225ENST00000601912 RHBDF2Q6PJF5 856 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 HOOK3Q86VS8 718 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 MREGQ8N565 214 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 TTC16Q8NEE8 873 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 ADAMTS19Q8TE59 1207 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 WBP2Q969T9 261 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 VAT1Q99536 393 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 RAB6BQ9NRW1 208 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 CFAP97Q9P2B7 532 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 ZFP37Q9Y6Q3 630 aaPredicted RBP18.45■□□□□ 0.54
VRK3-225ENST00000601912 DOCK4Q8N1I0 1966 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 NUP205Q92621 2012 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 TYW5A2RUC4 315 aaKnown RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 MOSPD3O75425 235 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 CLDN11O75508 207 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 YBEYP58557 167 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 ZXDBP98169 803 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 SLC5A9Q2M3M2 681 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 PRSS36Q5K4E3 855 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 Q6ZNB5 142 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 HTR3DQ70Z44 454 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 CFAP52Q8N1V2 620 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 TAB3Q8N5C8 712 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 CPT1BQ92523 772 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 IGFLR1Q9H665 355 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 MRPS23Q9Y3D9 190 aaKnown RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 FARP1Q9Y4F1 1045 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 KCNK1O00180 336 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 LEFTY2O00292 366 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 NRG2O14511 850 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 GREM1O60565 184 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 RAMP2O60895 175 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 HSPA9P38646 679 aaKnown RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 PAPOLAP51003 745 aaKnown RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 NTHL1P78549 312 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 WASHC5Q12768 1159 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 KCNC3Q14003 757 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 POLD3Q15054 466 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 PARP15Q460N3 678 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 TMC5Q6UXY8 1006 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 CHST9Q7L1S5 443 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 TMC3Q7Z5M5 1100 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 CIR1Q86X95 450 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 ZCCHC9Q8N567 271 aaKnown RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 MYEOVQ96EZ4 313 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 NSUN3Q9H649 340 aaKnown RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 KLHL8Q9P2G9 620 aaPredicted RBP18.44■□□□□ 0.54
VRK3-225ENST00000601912 ZNF212Q9UDV6 495 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 TRHDEQ9UKU6 1024 aa18.44■□□□□ 0.54
VRK3-225ENST00000601912 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 RASA4BC9J798 803 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 TRDMT1O14717 391 aaKnown RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 CHADO15335 359 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 RASA4O43374 803 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 PAPLNO95428 1278 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 PTPN3P26045 913 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 CHKAP35790 457 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 FDFT1P37268 417 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 RPS24P62847 133 aaKnown RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 ZNF177Q13360 481 aaPredicted RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 C6orf118Q5T5N4 469 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 PID1Q7Z2X4 250 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 MTERF4Q7Z6M4 381 aaKnown RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 CCDC25Q86WR0 208 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 C12orf76Q8N812 135 aaPredicted RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 DEPDC1BQ8WUY9 529 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 PRCCQ92733 491 aaPredicted RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 PRICKLE1Q96MT3 831 aaPredicted RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 NOL6Q9H6R4 1146 aaKnown RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 VIPAS39Q9H9C1 493 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 IPO11Q9UI26 975 aaKnown RBP18.43■□□□□ 0.54
VRK3-225ENST00000601912 ATP8A1Q9Y2Q0 1164 aa18.43■□□□□ 0.54
VRK3-225ENST00000601912 DOCK6Q96HP0 2047 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 A0A1B0GVM2 712 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 TCAF2A6NFQ2 919 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 MAP2K7O14733 419 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 MATN3O15232 486 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 TSPAN3O60637 253 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 MAFKO60675 156 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 PPFIA2O75334 1257 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 ANO4Q32M45 955 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 CHRDL2Q6WN34 429 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 ZNF354CQ86Y25 554 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 ZNF567Q8N184 647 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 NAT8LQ8N9F0 302 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 HJURPQ8NCD3 748 aaPredicted RBP18.42■□□□□ 0.54
VRK3-225ENST00000601912 VN1R2Q8NFZ6 395 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms