RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 HNRNPH3P31942 346 aaKnown RBP19.9■□□□□ 0.78
UPF1-212ENST00000601689 P2RY2P41231 377 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 DPP6P42658 865 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 ACAP1Q15027 740 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 PLK5Q496M5 336 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 SPDYCQ5MJ68 293 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 SH3PXD2AQ5TCZ1 1133 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 ZNF783Q6ZMS7 281 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 KBTBD6Q86V97 674 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 OLIG1Q8TAK6 271 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 TBC1D31Q96DN5 1066 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 LMLNQ96KR4 655 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 MRGPRX1Q96LB2 322 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 EPAS1Q99814 870 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 INVSQ9Y283 1065 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 FARP1Q9Y4F1 1045 aaPredicted RBP19.9■□□□□ 0.78
UPF1-212ENST00000601689 PCDHGA5Q9Y5G8 931 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 TARSL2A2RTX5 802 aaKnown RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 AKR1B15C9JRZ8 316 aaPredicted RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 DNTTP04053 509 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 PLEKP08567 350 aaPredicted RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 HLA-EP13747 358 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 PTPRZ1P23471 2315 aaPredicted RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 HOXC13P31276 330 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 CAMK2GQ13555 558 aaPredicted RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 PTPRNQ16849 979 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 TTC31Q49AM3 519 aaPredicted RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 ACCSLQ4AC99 568 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 CXorf57Q6NSI4 855 aaKnown RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 METTL3Q86U44 580 aaKnown RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 APCDD1Q8J025 514 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 RLN3Q8WXF3 142 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 PIEZO1Q92508 2521 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 ERLEC1Q96DZ1 483 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 CCDC42Q96M95 316 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 FEM1AQ9BSK4 669 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 CATSPERBQ9H7T0 1116 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 ANLNQ9NQW6 1124 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 INTS6Q9UL03 887 aaKnown RBP19.89■□□□□ 0.77
UPF1-212ENST00000601689 HPCAL4Q9UM19 191 aa19.89■□□□□ 0.77
UPF1-212ENST00000601689 EDDM13A0A1B0GTR0 161 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 SSU72P8A0A1W2PR75 194 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 ILVBLA1L0T0 632 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 TMEM191CA6NGB0 347 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 EIF3CLB5ME19 914 aaKnown RBP19.88■□□□□ 0.77
UPF1-212ENST00000601689 ATMINO43313 823 aaPredicted RBP19.88■□□□□ 0.77
UPF1-212ENST00000601689 PRPSAP2O60256 369 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 CNTN5O94779 1100 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 MZF1P28698 734 aaPredicted RBP19.88■□□□□ 0.77
UPF1-212ENST00000601689 L1CAMP32004 1257 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 ZBTB16Q05516 673 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 SCAPQ12770 1279 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 ALFQ53S48 1182 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 TFAP2DQ7Z6R9 452 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 CCDC114Q96M63 670 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 EIF3CQ99613 913 aaKnown RBP19.88■□□□□ 0.77
UPF1-212ENST00000601689 DNAJC7Q99615 494 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 ABHD10Q9NUJ1 306 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 MPP6Q9NZW5 540 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 ARHGAP20Q9P2F6 1191 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 USP18Q9UMW8 372 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 SCML1Q9UN30 329 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 NCKAP1Q9Y2A7 1128 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 SNX10Q9Y5X0 201 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 FAM186AA6NE01 2351 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 PLXND1Q9Y4D7 1925 aa19.88■□□□□ 0.77
UPF1-212ENST00000601689 ZFHX2Q9C0A1 2572 aaPredicted RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 A0A087X0T9 212 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 DCLK1O15075 740 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 MFAP3LO75121 409 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 FAM228BP0C875 321 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 RHOQP17081 205 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 HTR7P34969 479 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 EIF4A3P38919 411 aaKnown RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 MAPKAPK2P49137 400 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 DHPSP49366 369 aaPredicted RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 RPL6Q02878 288 aaKnown RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 PIGHQ14442 188 aaPredicted RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 ARID5BQ14865 1188 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 SLC18A3Q16572 532 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 HNRNPA1L2Q32P51 320 aaKnown RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 PMS2CLQ68D20 193 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 ZNF776Q68DI1 518 aaPredicted RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 RETSATQ6NUM9 610 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 DSG4Q86SJ6 1040 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 ZNF683Q8IZ20 524 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 CCDC185Q8N715 623 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 CTNNBL1Q8WYA6 563 aaPredicted RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 RPL10LQ96L21 214 aaKnown RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 DUSP15Q9H1R2 295 aaPredicted RBP19.87■□□□□ 0.77
UPF1-212ENST00000601689 TMPRSS4Q9NRS4 437 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 IP6K2Q9UHH9 426 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 LCMT1Q9UIC8 334 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 CYP8B1Q9UNU6 501 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 SDK1Q7Z5N4 2213 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 ABCA7Q8IZY2 2146 aa19.87■□□□□ 0.77
UPF1-212ENST00000601689 CEP192Q8TEP8 1941 aa19.86■□□□□ 0.77
UPF1-212ENST00000601689 MYO1FO00160 1098 aa19.86■□□□□ 0.77
UPF1-212ENST00000601689 CREB3O43889 395 aa19.86■□□□□ 0.77
UPF1-212ENST00000601689 EPN2O95208 641 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms