RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	PDGFRA	P16234	1089 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ABCB4	P21439	1286 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	SOX5	P35711	763 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	SHC2	P98077	582 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ECT2L	Q008S8	904 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	MYL5	Q02045	173 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	GFPT1	Q06210	699 aa	Predicted RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	SLC12A1	Q13621	1099 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	SYCP1	Q15431	976 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	STX1A	Q16623	288 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	SLC25A52	Q3SY17	297 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ALF	Q53S48	1182 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	NAA35	Q5VZE5	725 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	RABEPK	Q7Z6M1	372 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM124A	Q86V42	546 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	DHX40	Q8IX18	779 aa	Known RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	RGL4	Q8IZJ4	473 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	MINDY1	Q8N5J2	469 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM131C	Q96AQ9	280 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ERGIC2	Q96RQ1	377 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	NLRC4	Q9NPP4	1024 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ANO10	Q9NW15	660 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	RRN3	Q9NYV6	651 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	SLC12A6	Q9UHW9	1150 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	EIF2B4	Q9UI10	523 aa	Known RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	TBC1D30	Q9Y2I9	924 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	AKAP13	Q12802	2813 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872		A0A1B0GTW7	788 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	DRGX	A6NNA5	263 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	ATP1A3	P13637	1013 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	CEACAM1	P13688	526 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	MMP8	P22894	467 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	SULT1E1	P49888	294 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	NOVA1	P51513	510 aa	Known RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	SNX16	P57768	344 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	RNASE9	P60153	205 aa	Known RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	CDR2	Q01850	454 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	GRIK2	Q13002	908 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	UAP1L1	Q3KQV9	507 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	WDR45B	Q5MNZ6	344 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	BRMS1L	Q5PSV4	323 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	SYCP2L	Q5T4T6	812 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	CCDC183	Q5T5S1	534 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	ZNF776	Q68DI1	518 aa	Predicted RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	USP30	Q70CQ3	517 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	ZNF677	Q86XU0	584 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	ZCCHC9	Q8N567	271 aa	Known RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	DEFB124	Q8NES8	71 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	RPRD1A	Q96P16	312 aa	Predicted RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	PSMB7	Q99436	277 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	FEM1A	Q9BSK4	669 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	TKTL2	Q9H0I9	626 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	PABPC3	Q9H361	631 aa	Known RBP	13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	WDCP	Q9H6R7	721 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	SYNC	Q9H7C4	482 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	EBF2	Q9HAK2	575 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	SUSD2	Q9UGT4	822 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	USP24	Q9UPU5	2620 aa		13.15	□□□□□ -0.3
FKRP-223	ENST00000600872	CACNA1B	Q00975	2339 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	EDDM13	A0A1B0GTR0	161 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	TCRBV5S1A1T	A0A578	114 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	MID1	O15344	667 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	ATP9B	O43861	1147 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	SEMA4F	O95754	770 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	IGHV4-34	P06331	123 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	METAP1	P53582	386 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	GSC	P56915	257 aa	Predicted RBP	13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	ST8SIA6	P61647	398 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	FAM193A	P78312	1265 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	TYRO3	Q06418	890 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	MTA1	Q13330	715 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	CST6	Q15828	149 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	RABGAP1L	Q5R372	815 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	SASS6	Q6UVJ0	657 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	STK40	Q8N2I9	435 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	AADAT	Q8N5Z0	425 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	EMC1	Q8N766	993 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	SLC30A5	Q8TAD4	765 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	RNF34	Q969K3	372 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	BIRC7	Q96CA5	298 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	C1orf74	Q96LT6	269 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	CFAP57	Q96MR6	1250 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	SYT11	Q9BT88	431 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	GTPBP2	Q9BX10	602 aa	Known RBP	13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	BTBD1	Q9H0C5	482 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	SIK2	Q9H0K1	926 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	NEUROG2	Q9H2A3	272 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	ADAMTS1	Q9UHI8	967 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	STAP1	Q9ULZ2	295 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	DAAM1	Q9Y4D1	1078 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	ZFHX4	Q86UP3	3567 aa		13.14	□□□□□ -0.31
FKRP-223	ENST00000600872	MEI4	A8MW99	385 aa		13.13	□□□□□ -0.31
FKRP-223	ENST00000600872	GOLGA8S	H3BPF8	625 aa		13.13	□□□□□ -0.31
FKRP-223	ENST00000600872	BCAT2	O15382	392 aa	Predicted RBP	13.13	□□□□□ -0.31
FKRP-223	ENST00000600872	CLDN11	O75508	207 aa		13.13	□□□□□ -0.31
FKRP-223	ENST00000600872	MOCS3	O95396	460 aa		13.13	□□□□□ -0.31
FKRP-223	ENST00000600872	GJB6	O95452	261 aa		13.13	□□□□□ -0.31

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