RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LRRC40Q9H9A6 602 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 MAN1C1Q9NR34 630 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 CACNG4Q9UBN1 327 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 SCOCQ9UIL1 159 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 LOC100653049A0A140TA62 436 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 KRT34O76011 436 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 FYNP06241 537 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 ALOX15P16050 662 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 TKTL1P51854 596 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 HSP90AA5PQ58FG0 334 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 RNF220Q5VTB9 566 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 KIAA0319Q5VV43 1072 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 CTU1Q7Z7A3 348 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 NPWQ8N729 165 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 ZNF781Q8N8C0 355 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 PHC3Q8NDX5 983 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 CCDC124Q96CT7 223 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 APOL2Q9BQE5 337 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 PRDM16Q9HAZ2 1276 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 GPAMQ9HCL2 828 aa20.69■□□□□ 0.9
SHKBP1-225ENST00000600733 NRCAMQ92823 1304 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 SHROOM3Q8TF72 1996 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 ZCWPW2A0A1B0GU75 182 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 CCDC189A1A4V9 331 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 PDHXO00330 501 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 ZBTB24O43167 697 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 ZMPSTE24O75844 475 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 AP2A1O95782 977 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 KCNE1P15382 129 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 PTPN1P18031 435 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 ADRA1BP35368 520 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 MAGEA12P43365 314 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 LIMK2P53671 638 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 CERCAMQ5T4B2 595 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 TMCO4Q5TGY1 634 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 WSCD1Q658N2 575 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 NAIF1Q69YI7 327 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 AGR3Q8TD06 166 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 GATA6Q92908 595 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 MAML3Q96JK9 1138 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 SLC2A13Q96QE2 648 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 MED10Q9BTT4 135 aa20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 TRIP12Q14669 1992 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-225ENST00000600733 ATP9BO43861 1147 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 SPRP35270 261 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 SERPINB8P50452 374 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 DSG1Q02413 1049 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 SNX17Q15036 470 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 CCDC153Q494R4 210 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 UBXN11Q5T124 520 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 TMEM135Q86UB9 458 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 ACVR1CQ8NER5 493 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 OR6Y1Q8NGX8 325 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 MOCOSQ96EN8 888 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 COG4Q9H9E3 785 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 RNF181Q9P0P0 153 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 A0A096LPK6 155 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 YJEFN3A6XGL0 299 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 DCXO43602 365 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 UBTFL6P0CB48 400 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 WARSP23381 471 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 RAPH1Q70E73 1250 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 ZNF467Q7Z7K2 595 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 EFCAB3Q8N7B9 438 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 ISL2Q96A47 359 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 ECSITQ9BQ95 431 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 ULBP1Q9BZM6 244 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 WDR6Q9NNW5 1121 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 ACSS2Q9NR19 701 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 BFARQ9NZS9 450 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 PCDHB12Q9Y5F1 795 aa20.67■□□□□ 0.9
SHKBP1-225ENST00000600733 E9PBE3 544 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 G3V2L1 256 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 GOLGA8TH3BQL2 631 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 DYNC1LI2O43237 492 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 XPOTO43592 962 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 KLHL41O60662 606 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CD68P34810 354 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CACNA2D1P54289 1103 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 TPI1P60174 286 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 ANKRD20A4Q4UJ75 823 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 XKR4Q5GH76 650 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 FRMD7Q6ZUT3 714 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 KCTD13Q8WZ19 329 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 S100A14Q9HCY8 104 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 DNAJB4Q9UDY4 337 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 IPPQ9Y573 584 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 SMIM35A0A1B0GVV1 85 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 STRNO43815 780 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 ZBTB14O43829 449 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CCNT2O60583 730 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 FKBP6O75344 327 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 HSPA4LO95757 839 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CDC42EP1Q00587 391 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CDC16Q13042 620 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 ZBTB17Q13105 803 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 SLC9B1Q4ZJI4 515 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 RNF111Q6ZNA4 994 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 GPRIN1Q7Z2K8 1008 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms