RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SCARA5Q6ZMJ2 495 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 ATG14Q6ZNE5 492 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 OVCA2Q8WZ82 227 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 SYN2Q92777 582 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 VCPIP1Q96JH7 1222 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 DNAJC7Q99615 494 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 ORAI3Q9BRQ5 295 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 NUCKS1Q9H1E3 243 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 SNX25Q9H3E2 840 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 AASDHPPTQ9NRN7 309 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 ADAMTS1Q9UHI8 967 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 FLNCQ14315 2725 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 LRRC53A6NM62 1247 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 WNT1P04628 370 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 TPM1P09493 284 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 CKMT2P17540 419 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 CLCN1P35523 988 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 SOX5P35711 763 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 STAT1P42224 750 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 PGFP49763 221 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 TUBP50607 506 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 SLC5A3P53794 718 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 ADKP55263 362 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 RACK1P63244 317 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 ARID5AQ03989 594 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 ILKQ13418 452 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 E4F1Q66K89 784 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 IRF2BP2Q7Z5L9 587 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 UNC93AQ86WB7 457 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 CNGA4Q8IV77 575 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 OR8K1Q8NGG5 319 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 OR6B3Q8NGW1 331 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 OR2T3Q8NH03 318 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 RFFLQ8WZ73 363 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 SPAG5Q96R06 1193 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 KCNK16Q96T55 309 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 GDF3Q9NR23 364 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 PCDHB4Q9Y5E5 795 aa14.44□□□□□ -0.1
SHKBP1-218ENST00000598907 NPC1O15118 1278 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 MDM4O15151 490 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 USP12O75317 370 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 IGHV4-34P06331 123 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 PNMA6AP0CW24 399 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 CD58P19256 250 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 FECHP22830 423 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 GNL1P36915 607 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 ARRB1P49407 418 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 NDST1P52848 882 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 RAD23BP54727 409 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 GOLGA8FQ08AF8 430 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 GOLGA8DPQ0D2H9 430 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 BNIP3Q12983 259 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 KIAA0895LQ68EN5 471 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 ANKS1BQ7Z6G8 1248 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 CRYBG2Q8N1P7 616 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 EXD3Q8N9H8 876 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 SNRNP27Q8WVK2 155 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 TWNKQ96RR1 684 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 KLF16Q9BXK1 252 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 B3GNT5Q9BYG0 378 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 ABHD10Q9NUJ1 306 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 KCNK4Q9NYG8 393 aa14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 SPTAN1Q13813 2472 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-218ENST00000598907 LRRK2Q5S007 2527 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 BOD1L1Q8NFC6 3051 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 K7ENP7 123 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 SDC3O75056 442 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 CLSTN1O94985 981 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 DNTTP04053 509 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 PAEPP09466 180 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 FERP16591 822 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 PRKCIP41743 596 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 GSDMDP57764 484 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 MEA1Q16626 185 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 SFMBT2Q5VUG0 894 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 INO80CQ6PI98 192 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 WDR59Q6PJI9 974 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 TMEM270Q6UE05 265 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 CCDC81Q6ZN84 652 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 CCDC186Q7Z3E2 898 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 SLC4A11Q8NBS3 891 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 RBBP8NLQ8NC74 664 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 GANCQ8TET4 914 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 SKA1Q96BD8 255 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 PANX2Q96RD6 677 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 MED10Q9BTT4 135 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 DPH1Q9BZG8 443 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 THSD1Q9NS62 852 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 ELOVL2Q9NXB9 296 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 HMGXB4Q9UGU5 601 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 SLC27A6Q9Y2P4 619 aa14.42□□□□□ -0.1
SHKBP1-218ENST00000598907 YKT6O15498 198 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 CYP26A1O43174 497 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 GFPT2O94808 682 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 ERVPABLB-1P60509 514 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 DAB2P98082 770 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 CDK17Q00537 523 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms