RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 KHNYNO15037 678 aaKnown RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 CALB1P05937 261 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 PDGFRAP16234 1089 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 ITPKAP23677 461 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 MZF1P28698 734 aaPredicted RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 CTSOP43234 321 aaPredicted RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 NRG1Q02297 640 aaPredicted RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 ZNF177Q13360 481 aaPredicted RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 AASDHQ4L235 1098 aaPredicted RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 FIGNQ5HY92 759 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 C9orf64Q5T6V5 341 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 SLC23A3Q6PIS1 610 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 STRADAQ7RTN6 431 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 EMC1Q8N766 993 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 OR52K2Q8NGK3 314 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 JOSD2Q8TAC2 188 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 RXFP2Q8WXD0 754 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 DNASE2BQ8WZ79 361 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 FOXJ1Q92949 421 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 VCPIP1Q96JH7 1222 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 SIK2Q9H0K1 926 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 ZNF212Q9UDV6 495 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 SLCO3A1Q9UIG8 710 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 LRRC53A6NM62 1247 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 PATE3B3GLJ2 98 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 NDUFS2O75306 463 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 CNTN5O94779 1100 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 ACADMP11310 421 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 KRT3P12035 628 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 SDC4P31431 198 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 RFC1P35251 1148 aaPredicted RBP13.43□□□□□ -0.26
USE1-207ENST00000596136 ADRA1BP35368 520 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 GGCXP38435 758 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 PBX1P40424 430 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 PRKCIP41743 596 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 RPS14P62263 151 aaKnown RBP13.43□□□□□ -0.26
USE1-207ENST00000596136 IRX4P78413 519 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
USE1-207ENST00000596136 ALFQ53S48 1182 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 ACAD10Q6JQN1 1059 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 PPP1R2P3Q6NXS1 205 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 WDR59Q6PJI9 974 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 DGLUCYQ7Z3D6 616 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 RABEPKQ7Z6M1 372 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 CEP76Q8TAP6 659 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 FAM129BQ96TA1 746 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 MTG2Q9H4K7 406 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 RETREG1Q9H6L5 497 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 TMPRSS4Q9NRS4 437 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 PPARGC1AQ9UBK2 798 aaKnown RBP13.43□□□□□ -0.26
USE1-207ENST00000596136 SCML1Q9UN30 329 aa13.43□□□□□ -0.26
USE1-207ENST00000596136 CHD5Q8TDI0 1954 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 ASCC3Q8N3C0 2202 aaKnown RBP13.42□□□□□ -0.26
USE1-207ENST00000596136 EDDM13A0A1B0GTR0 161 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 METTL12A8MUP2 240 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 TTC34A8MYJ7 566 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 E9PAM4 449 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 CDX4O14627 284 aaPredicted RBP13.42□□□□□ -0.26
USE1-207ENST00000596136 ATP9BO43861 1147 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 SIN3BO75182 1162 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 SERPINC1P01008 464 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 HDAC4P56524 1084 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 ATP11AP98196 1134 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 FANCCQ00597 558 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 DUOXA1Q1HG43 343 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 C15orf59Q2T9L4 293 aaPredicted RBP13.42□□□□□ -0.26
USE1-207ENST00000596136 ZSCAN23Q3MJ62 389 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 TRIM61Q5EBN2 209 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 ZNF776Q68DI1 518 aaPredicted RBP13.42□□□□□ -0.26
USE1-207ENST00000596136 LRRC31Q6UY01 552 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 USP30Q70CQ3 517 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 SETD3Q86TU7 594 aaPredicted RBP13.42□□□□□ -0.26
USE1-207ENST00000596136 FAM131BQ86XD5 332 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 MCOLN2Q8IZK6 566 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 DEFB119Q8N690 84 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 FRS2Q8WU20 508 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 PTPRN2Q92932 1015 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 RPL10LQ96L21 214 aaKnown RBP13.42□□□□□ -0.26
USE1-207ENST00000596136 HSPA12BQ96MM6 686 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 OSBPL2Q9H1P3 480 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 CAPN10Q9HC96 672 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 SNX10Q9Y5X0 201 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 NCOR2Q9Y618 2525 aa13.42□□□□□ -0.26
USE1-207ENST00000596136 C10orf142B7Z368 130 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 GJB6O95452 261 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 DNTTP04053 509 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 SERPINF2P08697 491 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 GZMAP12544 262 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 TNFAIP3P21580 790 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms