RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TRPV4Q9HBA0 871 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 EPB41L5Q9HCM4 733 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 GDE1Q9NZC3 331 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 ZFP37Q9Y6Q3 630 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 CDH23Q9H251 3354 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 A0A1B0GVM2 712 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 TCAF2A6NFQ2 919 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 RASA4BC9J798 803 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 SCAMP3O14828 347 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 RASA4O43374 803 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 TSPAN3O60637 253 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 CLDN11O75508 207 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 ETS1P14921 441 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 YBEYP58557 167 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 PPP1R7Q15435 360 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 TRADDQ15628 312 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 FAM78AQ5JUQ0 283 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 GSTA5Q7RTV2 222 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 PRUNE1Q86TP1 453 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 LRRC49Q8IUZ0 686 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 IFT20Q8IY31 132 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 CFAP52Q8N1V2 620 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 CELF5Q8N6W0 485 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 CCHCR1Q8TD31 782 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 LRRN4Q8WUT4 740 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 RSAD2Q8WXG1 361 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 FGF13Q92913 245 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 RSPRY1Q96DX4 576 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 ASB16Q96NS5 453 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 HINFPQ9BQA5 517 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 FAM114A2Q9NRY5 505 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 GRHL1Q9NZI5 618 aa15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 UTP11Q9Y3A2 253 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-211ENST00000595945 ESYT3A0FGR9 886 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 C5orf60A6NFR6 353 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 SGK1O00141 431 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 KCNN4O15554 427 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 GCATO75600 419 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 ZSCAN5DPP0CG00 497 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 FCARP24071 287 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CHKAP35790 457 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 RPL21P46778 160 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 PAPOLAP51003 745 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 TRIP13Q15645 432 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 MPPE1Q53F39 396 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 ATAT1Q5SQI0 421 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 MPP7Q5T2T1 576 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CES5AQ6NT32 575 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CCNI2Q6ZMN8 369 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CCDC13Q8IYE1 715 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CCDC89Q8N998 374 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 EIF1ADQ8N9N8 165 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 TDRD5Q8NAT2 981 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 HTR3CQ8WXA8 447 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 SMARCD2Q92925 531 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 FATE1Q969F0 183 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 TMA16Q96EY4 203 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 LRRC3BQ96PB8 259 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CLDND1Q9NY35 253 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 OBP2AQ9NY56 170 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 CDH7Q9ULB5 785 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 TBC1D30Q9Y2I9 924 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 SNX24Q9Y343 169 aa15.11■□□□□ 0.01
SHKBP1-211ENST00000595945 MIA3Q5JRA6 1907 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 ILVBLA1L0T0 632 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 ARHGAP42A6NI28 874 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 DFFAO00273 331 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 DYNC1I1O14576 645 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 TBL1XO60907 577 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 IGFBP4P22692 258 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 CCNCP24863 283 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 MCM3P25205 808 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 ECHS1P30084 290 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 RPL22P35268 128 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 MTHFRP42898 656 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 CARSP49589 748 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 NRLP54845 237 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 AP1B1Q10567 949 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 WASHC5Q12768 1159 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 CUL1Q13616 776 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 P3H1Q32P28 736 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 PARP15Q460N3 678 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 HEATR6Q6AI08 1181 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 CXorf57Q6NSI4 855 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 ARHGAP36Q6ZRI8 547 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 GET4Q7L5D6 327 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 SETD3Q86TU7 594 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 OR52K2Q8NGK3 314 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 DEPDC1BQ8WUY9 529 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 ANKRD7Q92527 254 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 OTUB2Q96DC9 234 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 HMCESQ96FZ2 354 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 RIPOR3Q96MK2 946 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 MYADMQ96S97 322 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 TRIM31Q9BZY9 425 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 MAGEH1Q9H213 219 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 DPH5Q9H2P9 285 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms