RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FEM1AQ9BSK4 669 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 TAS2R14Q9NYV8 317 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 PILRBQ9UKJ0 227 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CDV3Q9UKY7 258 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 PI4KAP42356 2102 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 IGLV3-10A0A075B6K4 115 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 SIGLEC16A6NMB1 481 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 TTC34A8MYJ7 566 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 SDHBP21912 280 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 PTPN9P43378 593 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 CDH4P55283 916 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 OXCT1P55809 520 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 ST8SIA6P61647 398 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 RPS14P62263 151 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF33AQ06730 810 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF177Q13360 481 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 AASDHQ4L235 1098 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 C9orf64Q5T6V5 341 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 ACBD5Q5T8D3 534 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 PEAR1Q5VY43 1037 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 LYSMD4Q5XG99 296 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 WDR59Q6PJI9 974 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 CACUL1Q86Y37 369 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 SYT12Q8IV01 421 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 MCOLN2Q8IZK6 566 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 EDEM3Q9BZQ6 932 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 FBRSQ9HAH7 460 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 NUMA1Q14980 2115 aa19.03■□□□□ 0.64
SHKBP1-202ENST00000593764 ITIH6Q6UXX5 1313 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 E9PAM4 449 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 SLC30A4O14863 429 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 SIN3BO75182 1162 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 TNFAIP3P21580 790 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 SDC4P31431 198 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 ADRA1BP35368 520 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 STK19P49842 368 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 UBASH3AP57075 661 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 IRX4P78413 519 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 CDO1Q16878 200 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 FIGNQ5HY92 759 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 STRADAQ7RTN6 431 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF571Q7Z3V5 609 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 SELENOOQ9BVL4 669 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 RSPH9Q9H1X1 276 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 HAUS4Q9H6D7 363 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 MPP6Q9NZW5 540 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF212Q9UDV6 495 aa19.02■□□□□ 0.64
SHKBP1-202ENST00000593764 LNP1A1A4G5 178 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 NDUFS2O75306 463 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 ACADMP11310 421 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 OXTRP30559 389 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 PRKCIP41743 596 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 VASPP50552 380 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 LIMK1P53667 647 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 HDAC4P56524 1084 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 RPL7AP62424 266 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 TPM4P67936 248 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 SULT2A1Q06520 285 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 ASIC2Q16515 512 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 PPP1R15BQ5SWA1 713 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 SFMBT2Q5VUG0 894 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 RNF219Q5W0B1 726 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 LRRC31Q6UY01 552 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 PTPRN2Q92932 1015 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 HSPA12BQ96MM6 686 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 RTKNQ9BST9 563 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 NUP58Q9BVL2 599 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 GPR174Q9BXC1 333 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 MAGEB5Q9BZ81 275 aa19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 EVLQ9UI08 416 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-202ENST00000593764 ATXN2Q99700 1313 aaKnown RBP19■□□□□ 0.63
SHKBP1-202ENST00000593764 SPTBN2O15020 2390 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 TARSL2A2RTX5 802 aaKnown RBP19■□□□□ 0.63
SHKBP1-202ENST00000593764 KHNYNO15037 678 aaKnown RBP19■□□□□ 0.63
SHKBP1-202ENST00000593764 SRGAP2O75044 1071 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 RRM1P23921 792 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 HOXD12P35452 270 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 ZBTB16Q05516 673 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 ERMP1Q7Z2K6 904 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 DGLUCYQ7Z3D6 616 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 FRS2Q8WU20 508 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM172AQ8WUF8 416 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 VCPIP1Q96JH7 1222 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 PPP1R9BQ96SB3 815 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM129BQ96TA1 746 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 PSMB7Q99436 277 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 DOCK4Q8N1I0 1966 aa19■□□□□ 0.63
SHKBP1-202ENST00000593764 CNOT1A5YKK6 2376 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 EDDM13A0A1B0GTR0 161 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 DCDC2BA2VCK2 349 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 TMCO5BA8MYB1 307 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 GOLGA6L19H0YKK7 550 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 DDX3XO00571 662 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 TM4SF5O14894 197 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 SKILP12757 684 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 VAV1P15498 845 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 GPD1P21695 349 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 DPP6P42658 865 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 ZNF143P52747 638 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms