RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SOWAHCQ53LP3 525 aaPredicted RBP15.23■□□□□ 0.03
PNKP-202ENST00000593706 DCAF6Q58WW2 860 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 SLC45A4Q5BKX6 768 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 PRAMEF14Q5SWL7 426 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 C9orf64Q5T6V5 341 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 RAP1GAP2Q684P5 730 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 SND1Q7KZF4 910 aaKnown RBP eCLIP15.23■□□□□ 0.03
PNKP-202ENST00000593706 RRAGAQ7L523 313 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 SCUBE3Q8IX30 993 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 LGI2Q8N0V4 545 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 CNDP2Q96KP4 475 aaKnown RBP15.23■□□□□ 0.03
PNKP-202ENST00000593706 KREMEN1Q96MU8 473 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 DCBLD2Q96PD2 775 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 CNTN6Q9UQ52 1028 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 NAALADL1Q9UQQ1 740 aa15.23■□□□□ 0.03
PNKP-202ENST00000593706 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.23■□□□□ 0.03
PNKP-202ENST00000593706 SETXQ7Z333 2677 aaKnown RBP15.22■□□□□ 0.03
PNKP-202ENST00000593706 ITIH6Q6UXX5 1313 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 CBX4O00257 560 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 PLK4O00444 970 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 YKT6O15498 198 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 RFPL3O75679 317 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 LDOC1O95751 146 aaPredicted RBP15.22■□□□□ 0.03
PNKP-202ENST00000593706 IL1BP01584 269 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 KRT5P13647 590 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 NNMTP40261 264 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 ARRB1P49407 418 aaPredicted RBP15.22■□□□□ 0.03
PNKP-202ENST00000593706 NUMBP49757 651 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 STK19P49842 368 aaPredicted RBP15.22■□□□□ 0.03
PNKP-202ENST00000593706 ADPRHP54922 357 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 CAMK2BQ13554 666 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 TMPRSS12Q86WS5 348 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 STK40Q8N2I9 435 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 AADATQ8N5Z0 425 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 EHBP1Q8NDI1 1231 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 NXPE2Q96DL1 559 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 SERAC1Q96JX3 654 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 RPL10LQ96L21 214 aaKnown RBP15.22■□□□□ 0.03
PNKP-202ENST00000593706 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
PNKP-202ENST00000593706 EBF2Q9HAK2 575 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 TRPM6Q9BX84 2022 aa15.22■□□□□ 0.03
PNKP-202ENST00000593706 ATMQ13315 3056 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 E9PAM4 449 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 F5H5T6 163 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.03
PNKP-202ENST00000593706 WNT1P04628 370 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 FYNP06241 537 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 GOT1P17174 413 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 TACR2P21452 398 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 C5AR1P21730 350 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 MZF1P28698 734 aaPredicted RBP15.21■□□□□ 0.03
PNKP-202ENST00000593706 ACADSBP45954 432 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 CCR5P51681 352 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 DNAJC3Q13217 504 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 KCNJ12Q14500 433 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 ELAVL3Q14576 367 aaKnown RBP15.21■□□□□ 0.03
PNKP-202ENST00000593706 C6orf118Q5T5N4 469 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.03
PNKP-202ENST00000593706 APCDD1Q8J025 514 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 EID2Q8N6I1 236 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 GPT2Q8TD30 523 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 SLC39A13Q96H72 371 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 BTN2A3PQ96KV6 586 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 XPO7Q9UIA9 1087 aaKnown RBP15.21■□□□□ 0.03
PNKP-202ENST00000593706 SLCO3A1Q9UIG8 710 aa15.21■□□□□ 0.03
PNKP-202ENST00000593706 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.03
PNKP-202ENST00000593706 TBC1D3DA0A087WVF3 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3IA0A087WXS9 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3EA0A087X179 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3LB9A6J9 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3HP0C7X1 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 JUPP14923 745 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 PDGFRAP16234 1089 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 EPHA8P29322 1005 aaPredicted RBP15.2■□□□□ 0.02
PNKP-202ENST00000593706 ABCG1P45844 678 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 ZC3H12AQ5D1E8 599 aaKnown RBP15.2■□□□□ 0.02
PNKP-202ENST00000593706 SYPL2Q5VXT5 272 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3CQ6IPX1 549 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 TBC1D3Q8IZP1 549 aaPredicted RBP15.2■□□□□ 0.02
PNKP-202ENST00000593706 OXR1Q8N573 874 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 ATP6V0D2Q8N8Y2 350 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 SAP25Q8TEE9 199 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 FAM129BQ96TA1 746 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 POPDC2Q9HBU9 364 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 PCDHGA1Q9Y5H4 931 aa15.2■□□□□ 0.02
PNKP-202ENST00000593706 MGAQ8IWI9 3026 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 A0A087WV48 116 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 A0A1B0GVM2 712 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 GTPBP10A4D1E9 387 aaKnown RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 TCAF2A6NFQ2 919 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 E5RJQ4 531 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 TLR4O00206 839 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 WNT9AO14904 365 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 MED7O43513 233 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms