RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TRIM59Q8IWR1 403 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 OR14C36Q8NHC7 312 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 NELFBQ8WX92 580 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 CNDP2Q96KP4 475 aaKnown RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 BBC3Q96PG8 261 aaPredicted RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 ACP6Q9NPH0 428 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 TJP2Q9UDY2 1190 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 CTNND2Q9UQB3 1225 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 PLK4O00444 970 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 ADH1BP00325 375 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 IL1BP01584 269 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 ITGAVP06756 1048 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 PDGFRAP16234 1089 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 GOT1P17174 413 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 ABCB4P21439 1286 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 EPHA8P29322 1005 aaPredicted RBP16.88■□□□□ 0.29
LIG1-205ENST00000593425 EIF4EBP2Q13542 120 aaPredicted RBP16.88■□□□□ 0.29
LIG1-205ENST00000593425 ELAVL3Q14576 367 aaKnown RBP16.88■□□□□ 0.29
LIG1-205ENST00000593425 TAF5Q15542 800 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
LIG1-205ENST00000593425 SKA1Q96BD8 255 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 SERAC1Q96JX3 654 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 BTN2A3PQ96KV6 586 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 PRMT1Q99873 361 aaKnown RBP16.88■□□□□ 0.29
LIG1-205ENST00000593425 INTS2Q9H0H0 1204 aaKnown RBP16.88■□□□□ 0.29
LIG1-205ENST00000593425 POPDC2Q9HBU9 364 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 GDF3Q9NR23 364 aa16.88■□□□□ 0.29
LIG1-205ENST00000593425 APC2O95996 2303 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 F5H5T6 163 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 LETM1O95202 739 aaPredicted RBP16.87■□□□□ 0.29
LIG1-205ENST00000593425 PPP1R2P41236 205 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 ACADVLP49748 655 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 STX17P56962 302 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 NXPH1P58417 271 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 CXorf57Q6NSI4 855 aaKnown RBP16.87■□□□□ 0.29
LIG1-205ENST00000593425 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.87■□□□□ 0.29
LIG1-205ENST00000593425 TMEM110Q86TL2 294 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 TMPRSS12Q86WS5 348 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 EID2Q8N6I1 236 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 ATP6V0D2Q8N8Y2 350 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 STK32AQ8WU08 396 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 FRS2Q8WU20 508 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 ZNF606Q8WXB4 792 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 TRIM62Q9BVG3 475 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 HOOK1Q9UJC3 728 aaKnown RBP16.87■□□□□ 0.29
LIG1-205ENST00000593425 PCDHGA1Q9Y5H4 931 aa16.87■□□□□ 0.29
LIG1-205ENST00000593425 MYLKQ15746 1914 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 LOC400499M0QZD8 3231 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 DOCK9Q9BZ29 2069 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 A0A087WV48 116 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 KCNU1A8MYU2 1149 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 LATO43561 262 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 RFPL3O75679 317 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 LDOC1O95751 146 aaPredicted RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 AFPP02771 609 aaKnown RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 GNA15P30679 374 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 IRAK1P51617 712 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 YWHAZP63104 245 aaKnown RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 NUCB2P80303 420 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 CENPCQ03188 943 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 BNIP3Q12983 259 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 PDCLQ13371 301 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 MEA1Q16626 185 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 FOXR2Q6PJQ5 311 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 SPATS2Q86XZ4 545 aaKnown RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 OR52K2Q8NGK3 314 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 FAM131CQ96AQ9 280 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.86■□□□□ 0.29
LIG1-205ENST00000593425 ARHGAP20Q9P2F6 1191 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 SARDHQ9UL12 918 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 GOLGA4Q13439 2230 aaKnown RBP16.86■□□□□ 0.29
LIG1-205ENST00000593425 ACACAQ13085 2346 aa16.86■□□□□ 0.29
LIG1-205ENST00000593425 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3DA0A087WVF3 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3IA0A087WXS9 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3EA0A087X179 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3KA0A087X1G2 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 A0A1B0GVM2 712 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 BICDL2A1A5D9 508 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3FA6NER0 549 aaPredicted RBP16.85■□□□□ 0.29
LIG1-205ENST00000593425 TCAF2A6NFQ2 919 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3LB9A6J9 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 E9PAM4 449 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TLR4O00206 839 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 YKT6O15498 198 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 THAP12O43422 761 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 MED7O43513 233 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 RTN2O75298 545 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3HP0C7X1 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 NNMTP40261 264 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 SLC12A1Q13621 1099 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 MORC3Q14149 939 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3GQ6DHY5 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3CQ6IPX1 549 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 NAPEPLDQ6IQ20 393 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 FBXL22Q6P050 247 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms