RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ACBD5Q5T8D3 534 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CASC4Q6P4E1 433 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 TMEM199Q8N511 208 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ZNF473Q8WTR7 871 aaKnown RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 SLC44A1Q8WWI5 657 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 TRIM43Q96BQ3 446 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 TEKT5Q96M29 485 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CCT8L2Q96SF2 557 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 GORASP1Q9BQQ3 440 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CLSTN3Q9BQT9 956 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ZYG11BQ9C0D3 744 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 FAM107BQ9H098 131 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CCDC134Q9H6E4 229 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 MPP6Q9NZW5 540 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 HSFX1Q9UBD0 423 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 MRPL42Q9Y6G3 142 aaKnown RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 PTPRSQ13332 1948 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 DOCK4Q8N1I0 1966 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 NUP205Q92621 2012 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 IQANK1A0A1B0GTG1 560 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 FAM47DPA6NHR8 397 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PRPF4O43172 522 aaKnown RBP eCLIP12.22□□□□□ -0.45
NPC1-214ENST00000593280 SUN1O94901 812 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 URODP06132 367 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 RHOQP17081 205 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PRKCHP24723 683 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 MGAT1P26572 445 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 CD68P34810 354 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 IFNAR2P48551 515 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 SESN2P58004 480 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 RING1Q06587 406 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 MTA1Q13330 715 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PRPSAP1Q14558 356 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 NUGGCQ68CJ6 796 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 TPGS2Q68CL5 300 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 TIGD7Q6NT04 549 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 FOXR1Q6PIV2 292 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ARHGAP36Q6ZRI8 547 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PRPF39Q86UA1 669 aaKnown RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 CCNJLQ8IV13 435 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ZNF683Q8IZ20 524 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ZNF461Q8TAF7 563 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 OVCA2Q8WZ82 227 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 DPF3Q92784 378 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 CHMP6Q96FZ7 201 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 ZNF512Q96ME7 567 aaPredicted RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 NAT9Q9BTE0 207 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 KIF9Q9HAQ2 790 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 DONSONQ9NYP3 566 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 SPG21Q9NZD8 308 aa12.22□□□□□ -0.45
NPC1-214ENST00000593280 SMG5Q9UPR3 1016 aaKnown RBP12.22□□□□□ -0.45
NPC1-214ENST00000593280 CCDC85CA6NKD9 419 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 MAFKO60675 156 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SPAG7O75391 227 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 BAIAP3O94812 1187 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 ABLIM3O94929 683 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SEC24AO95486 1093 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 CCNB1P14635 433 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 PGAM1P18669 254 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 HNRNPH2P55795 449 aaKnown RBP12.21□□□□□ -0.46
NPC1-214ENST00000593280 MPP2Q14168 576 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SPARCL1Q14515 664 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 LRRC14Q15048 493 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 RAP1GAP2Q684P5 730 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 STEAP4Q687X5 459 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 DDX53Q86TM3 631 aaKnown RBP12.21□□□□□ -0.46
NPC1-214ENST00000593280 TAX1BP1Q86VP1 789 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SLC26A11Q86WA9 606 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 LRRC6Q86X45 466 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 LRRC49Q8IUZ0 686 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 C4orf33Q8N1A6 199 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 PPM1NQ8N819 430 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 USP33Q8TEY7 942 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SGSM3Q96HU1 749 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 YME1L1Q96TA2 773 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 MLPHQ9BV36 600 aaPredicted RBP12.21□□□□□ -0.46
NPC1-214ENST00000593280 NACA2Q9H009 215 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 LRRC40Q9H9A6 602 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 CYP4F11Q9HBI6 524 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SSU72Q9NP77 194 aaKnown RBP12.21□□□□□ -0.46
NPC1-214ENST00000593280 NDFIP2Q9NV92 336 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 PIH1D1Q9NWS0 290 aaKnown RBP12.21□□□□□ -0.46
NPC1-214ENST00000593280 SYBUQ9NX95 663 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 SAMD15Q9P1V8 674 aa12.21□□□□□ -0.46
NPC1-214ENST00000593280 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.46
NPC1-214ENST00000593280 IGLV3-10A0A075B6K4 115 aa12.2□□□□□ -0.46
NPC1-214ENST00000593280 A0A1W2PPM1 405 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms