RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 STC2O76061 302 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 LATS1O95835 1130 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 MX2P20592 715 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 GGCXP38435 758 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 ID4P47928 161 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 CARSP49589 748 aaKnown RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 TRADDQ15628 312 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 C5orf22Q49AR2 442 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 MAP9Q49MG5 647 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 ATAT1Q5SQI0 421 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 TXNDC8Q6A555 127 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 RWDD4Q6NW29 188 aaKnown RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 DARS2Q6PI48 645 aaKnown RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 FBXO38Q6PIJ6 1188 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 TMC5Q6UXY8 1006 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 ERMP1Q7Z2K6 904 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 ZC3H18Q86VM9 953 aaKnown RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 RSAD2Q8WXG1 361 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 IFT81Q8WYA0 676 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 BRD8Q9H0E9 1235 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 USP29Q9HBJ7 922 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 PCDH9Q9HC56 1237 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 TRPC7Q9HCX4 862 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 GKN1Q9NS71 199 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 WHRNQ9P202 907 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 DNMT3BQ9UBC3 853 aaKnown RBP13.84□□□□□ -0.19
VMP1-217ENST00000593168 ZMYM5Q9UJ78 669 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 SNX24Q9Y343 169 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 MFHAS1Q9Y4C4 1052 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 OBSL1O75147 1896 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 A0A1W2PRU2 124 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 PPP1R12AO14974 1030 aaPredicted RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 MFSD11O43934 449 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 KLKB1P03952 638 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 RHOQP17081 205 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 AOC1P19801 751 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 ITIH2P19823 946 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 TACR2P21452 398 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 IVDP26440 423 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 CLCN6P51797 869 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 CYP4F8P98187 520 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 SLC45A4Q5BKX6 768 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 RAP1GAP2Q684P5 730 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 RTL3Q8N8U3 475 aaKnown RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 BBOF1Q8ND07 529 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 SHKBP1Q8TBC3 707 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 TFB1MQ8WVM0 346 aaKnown RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 RTP4Q96DX8 246 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 QKIQ96PU8 341 aaKnown RBP eCLIP13.83□□□□□ -0.28e-15■■■■■ 49.6
VMP1-217ENST00000593168 SLC22A12Q96S37 553 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 DDX50Q9BQ39 737 aaKnown RBP13.83□□□□□ -0.2
VMP1-217ENST00000593168 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 KLC2Q9H0B6 622 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 DPH5Q9H2P9 285 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 TASP1Q9H6P5 420 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 ASIC3Q9UHC3 531 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 STOML2Q9UJZ1 356 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 VANGL2Q9ULK5 521 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 WDR87Q6ZQQ6 2873 aa13.83□□□□□ -0.2
VMP1-217ENST00000593168 ZNF292O60281 2723 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 CCDC195A0A1B0GUA6 201 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 F5H5T6 163 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 ZNF197O14709 1029 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 NDC80O14777 642 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 MOSPD3O75425 235 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 RHOP08100 348 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 MYBL2P10244 700 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 RBL1P28749 1068 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 ECHS1P30084 290 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 ADCY8P40145 1251 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 CCR2P41597 374 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 ZNF33AQ06730 810 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 GALNT2Q10471 571 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 PRKD1Q15139 912 aaPredicted RBP13.82□□□□□ -0.2
VMP1-217ENST00000593168 ANGPT1Q15389 498 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 TRIP13Q15645 432 aaPredicted RBP13.82□□□□□ -0.2
VMP1-217ENST00000593168 ARHGAP15Q53QZ3 475 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
VMP1-217ENST00000593168 PRSS36Q5K4E3 855 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 BEND6Q5SZJ8 279 aaPredicted RBP13.82□□□□□ -0.2
VMP1-217ENST00000593168 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 EMBQ6PCB8 327 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 C4orf22Q6V702 233 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 NLRP14Q86W24 1093 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 CHSY1Q86X52 802 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 DDX42Q86XP3 938 aaKnown RBP eCLIP13.82□□□□□ -0.2
VMP1-217ENST00000593168 DENND1CQ8IV53 801 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 NPWQ8N729 165 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 AENQ8WTP8 325 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms