RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 PRORYQ9H606 182 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 ARHGAP20Q9P2F6 1191 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 ITPR1Q14643 2758 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 TLR4O00206 839 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 TRIM38O00635 465 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 SLC16A3O15427 465 aaKnown RBP11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 IRAK2O43187 625 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 BRINP1O60477 761 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 PAEPP09466 180 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 GOT1P17174 413 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 TBXAS1P24557 533 aaPredicted RBP11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 YWHAEP62258 255 aaKnown RBP11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 CNGA2Q16280 664 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 KDM7AQ6ZMT4 941 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 SND1Q7KZF4 910 aaKnown RBP eCLIP11.57□□□□□ -0.565e-10■■■□□ 15.9
PRKCSH-220ENST00000593104 ENGASEQ8NFI3 743 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 IRGQQ8WZA9 623 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 KREMEN1Q96MU8 473 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 SERPINB11Q96P15 392 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 NT5C1BQ96P26 610 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 FCRL3Q96P31 734 aaPredicted RBP11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 FZD3Q9NPG1 666 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 UCKL1Q9NWZ5 548 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 FZD4Q9ULV1 537 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 SCML1Q9UN30 329 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 TLR6Q9Y2C9 796 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 PCDHB1Q9Y5F3 818 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 ITIH6Q6UXX5 1313 aa11.57□□□□□ -0.56
PRKCSH-220ENST00000593104 SMG1Q96Q15 3661 aaKnown RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 A0A1W2PQ27 194 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 A0A1W2PQ64 194 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 TARSL2A2RTX5 802 aaKnown RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 TYW5A2RUC4 315 aaKnown RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 E5RJQ4 531 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 PYCARD-AS1I3L0S3 204 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 FFAR2O15552 330 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 SIGLEC6O43699 453 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 KRT10P13645 584 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 PRLRP16471 622 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 C5AR1P21730 350 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 HNF1BP35680 557 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 GPD2P43304 727 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 CCR5P51681 352 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 FKBP3Q00688 224 aaKnown RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 INSM1Q01101 510 aaPredicted RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 CNTN1Q12860 1018 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 ZNF658Q5TYW1 1059 aaPredicted RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 SFMBT2Q5VUG0 894 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 RNF219Q5W0B1 726 aaPredicted RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 KLHL10Q6JEL2 608 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 GJB7Q6PEY0 223 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 PCSK4Q6UW60 755 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 Q6ZVU0 165 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 CCAR2Q8N163 923 aaKnown RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 FRS2Q8WU20 508 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 AZIN2Q96A70 460 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 HSFY1Q96LI6 401 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 UBL7Q96S82 380 aaPredicted RBP11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 TSG101Q99816 390 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 SNX10Q9Y5X0 201 aa11.56□□□□□ -0.56
PRKCSH-220ENST00000593104 IGSF10Q6WRI0 2623 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 CAPN9O14815 690 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 SLC31A1O15431 190 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 LATO43561 262 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 DFNA5O60443 496 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 GRAP2O75791 330 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 FBXO21O94952 628 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 MOCS3O95396 460 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 TRUB2O95900 331 aaKnown RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 ADH1BP00325 375 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 APOEP02649 317 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 KRT5P13647 590 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 GLDCP23378 1020 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 ARRB1P49407 418 aaPredicted RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 TAS2R38P59533 333 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 APBA1Q02410 837 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 ARID5BQ14865 1188 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 ACCSLQ4AC99 568 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 CCDC40Q4G0X9 1142 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 ZNF542PQ5EBM4 170 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 AGBL4Q5VU57 503 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 NAPEPLDQ6IQ20 393 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 CXorf57Q6NSI4 855 aaKnown RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 LRRC69Q6ZNQ3 347 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 TMC6Q7Z403 805 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 CCDC117Q8IWD4 279 aaPredicted RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 SLC25A45Q8N413 288 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 NOX5Q96PH1 765 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 PRMT1Q99873 361 aaKnown RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 DDX50Q9BQ39 737 aaKnown RBP11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 KIAA1257Q9ULG3 409 aa11.55□□□□□ -0.56
PRKCSH-220ENST00000593104 F5H5T6 163 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms