RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 A0A1W2PP55 124 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 FAM47DPA6NHR8 397 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 EPHB6O15197 1021 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 GJB3O75712 270 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 ADCY5O95622 1261 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 FLT3P36888 993 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 SCNN1AP37088 669 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 NNMTP40261 264 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 PSMD8P48556 350 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 CSNK1EP49674 416 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 CXCR3P49682 368 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 PLK1P53350 603 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 OXCT1P55809 520 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 NOMO3P69849 1222 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 SIM1P81133 766 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 DEUP1Q05D60 604 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 SULT2A1Q06520 285 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 BRMS1LQ5PSV4 323 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 USP30Q70CQ3 517 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 STK40Q8N2I9 435 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 MSANTD4Q8NCY6 345 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 OR52K2Q8NGK3 314 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 SLC20A1Q8WUM9 679 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 PTPRN2Q92932 1015 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 NT5C3BQ969T7 300 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 BIRC7Q96CA5 298 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 ANLNQ9NQW6 1124 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 ARHGEF38Q9NXL2 777 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 NOCTQ9UK39 431 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 SCML1Q9UN30 329 aa13.48□□□□□ -0.25
PRKCSH-218ENST00000593053 PCDH15Q96QU1 1955 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 I6L893 689 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SH3BP5O60239 455 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 CLDN11O75508 207 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 RNASEH2AO75792 299 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 CNTN5O94779 1100 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 F9P00740 461 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 VAV1P15498 845 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SPINK2P20155 84 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 CD27P26842 260 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SLC8A1P32418 973 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 FAM193AP78312 1265 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 BNC1Q01954 994 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 MYL5Q02045 173 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SFSWAPQ12872 951 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SLC14A1Q13336 389 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 ELAVL3Q14576 367 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 STX1AQ16623 288 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SLC25A52Q3SY17 297 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 TRNP1Q6NT89 227 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 ALG14Q96F25 216 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 PGAP3Q96FM1 320 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 CAMK1GQ96NX5 476 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 OMDQ99983 421 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 NEUROG2Q9H2A3 272 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 GAREM1Q9H706 876 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 IL21RQ9HBE5 538 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 TM9SF3Q9HD45 589 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 TMPRSS4Q9NRS4 437 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 SIK3Q9Y2K2 1263 aa13.47□□□□□ -0.25
PRKCSH-218ENST00000593053 CHD8Q9HCK8 2581 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 CER1O95813 267 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 IL1BP01584 269 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 IGHV4-34P06331 123 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 ZNF18P17022 549 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 CHRNB2P17787 502 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 SOX5P35711 763 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 GALCP54803 685 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 CDH4P55283 916 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 JAM2P57087 298 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 FMO1Q01740 532 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 CDR2Q01850 454 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 SYCP1Q15431 976 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 HLA-BQ31612 363 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 C5orf22Q49AR2 442 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 ALFQ53S48 1182 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 KIAA0895LQ68EN5 471 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 NCEH1Q6PIU2 408 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 LAYNQ6UX15 382 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 PHLDB2Q86SQ0 1253 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 ZNF677Q86XU0 584 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 AADATQ8N5Z0 425 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 CFAP57Q96MR6 1250 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 SPAG5Q96R06 1193 aa13.46□□□□□ -0.25
PRKCSH-218ENST00000593053 MUC3BQ9H195 1237 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms