RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 IGSF9Q9P2J2 1179 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 KPNA7A9QM74 516 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 SLC22A2O15244 555 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 CYP2C8P10632 490 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 PIK3R1P27986 724 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 PSMB4P28070 264 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 HSPA1LP34931 641 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 NOL9Q5SY16 702 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 ZFP1Q6P2D0 407 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 TDRD5Q8NAT2 981 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 SPATA33Q96N06 139 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 FERMT1Q9BQL6 677 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 UBAP1Q9NZ09 502 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 PTTG2Q9NZH5 202 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 WDR90Q96KV7 1748 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 A0A087WZ62 844 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 MFSD11O43934 449 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 CAPNS1P04632 268 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 LRRC23Q53EV4 343 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 PYROXD2Q8N2H3 581 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 KYQ8NBH2 561 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 CATSPER1Q8NEC5 780 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 RP9Q8TA86 221 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 SREK1Q8WXA9 508 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 STON2Q8WXE9 905 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 PGBD4Q96DM1 585 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 FDXACB1Q9BRP7 624 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 FZD10Q9ULW2 581 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 TMCO1Q9UM00 188 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 MATN2O00339 956 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 VILLO15195 856 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 CREB3O43889 395 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 PGM3O95394 542 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 SPATA31D3P0C874 917 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 RARS2Q5T160 578 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 BSPRYQ5W0U4 402 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 CES3Q6UWW8 571 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 SPATA31D4Q6ZUB0 917 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 PSTKQ8IV42 348 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 CPSF7Q8N684 471 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 ADCY4Q8NFM4 1077 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 FAM81AQ8TBF8 368 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 HIC2Q96JB3 615 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 OCEL1Q9H607 264 aa15.18■□□□□ 0.02
SMARCA4-219ENST00000592604 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 AIM2O14862 343 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 CLPTM1O96005 669 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 PMLP29590 882 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 ADSLP30566 484 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 HK2P52789 917 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 ADGRE1Q14246 886 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 PIGGQ5H8A4 983 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 STRA8Q7Z7C7 330 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 TMEM135Q86UB9 458 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 DSELQ8IZU8 1212 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 AHI1Q8N157 1196 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF567Q8N184 647 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 GATA5Q9BWX5 397 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 LRRC40Q9H9A6 602 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 BCAP29Q9UHQ4 241 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 RIMS3Q9UJD0 308 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 PHF24Q9UPV7 400 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 PLXNA1Q9UIW2 1896 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 A0A096LPK6 155 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 ASLP04424 464 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 CD1EP15812 388 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 SERPINB5P36952 375 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 NUDT2P50583 147 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 PDK1Q15118 436 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 CNGA3Q16281 694 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 SETD3Q86TU7 594 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 UNC93AQ86WB7 457 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 NMD3Q96D46 503 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 KIF12Q96FN5 646 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 SPATC1LQ9H0A9 340 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF696Q9H7X3 374 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 OXSMQ9NWU1 459 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 LZTS1Q9Y250 596 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 SNX9Q9Y5X1 595 aa15.17■□□□□ 0.02
SMARCA4-219ENST00000592604 E2F8A0AVK6 867 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 CRTAMO95727 393 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 CREB5Q02930 508 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 USP41Q3LFD5 358 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 BNC2Q6ZN30 1099 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 SNX32Q86XE0 403 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 LINC01465Q8N7H1 131 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 ZFRQ96KR1 1074 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 LRGUKQ96M69 825 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF385DQ9H6B1 395 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 NMRAL1Q9HBL8 299 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 RAP2CQ9Y3L5 183 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms