RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR2I1PQ8NGU4 316 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 SLC30A5Q8TAD4 765 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 DNASE2BQ8WZ79 361 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 CFAP57Q96MR6 1250 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 ERGIC2Q96RQ1 377 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 PCDHB18PQ96TA0 734 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 GTPBP2Q9BX10 602 aaKnown RBP14.3□□□□□ -0.12
APOC1-208ENST00000592535 METTL5Q9NRN9 209 aaKnown RBP14.3□□□□□ -0.12
APOC1-208ENST00000592535 SUSD2Q9UGT4 822 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 LAMA1P25391 3075 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 EDDM13A0A1B0GTR0 161 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 GIPC1O14908 333 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 CNTN5O94779 1100 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 F9P00740 461 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 GNSP15586 552 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 MMP8P22894 467 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 NOVA1P51513 510 aaKnown RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 ATXN3P54252 364 aaPredicted RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 ZNF177Q13360 481 aaPredicted RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 ARID5BQ14865 1188 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 TTC31Q49AM3 519 aaPredicted RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 PSAPL1Q6NUJ1 521 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 CAVIN1Q6NZI2 390 aaKnown RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 BNIPLQ7Z465 357 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 ZNF683Q8IZ20 524 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 ZCCHC9Q8N567 271 aaKnown RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 EMC1Q8N766 993 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 ALG14Q96F25 216 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 C11orf70Q9BRQ4 267 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 MIR1-1HGQ9H1L0 117 aa14.29□□□□□ -0.12
APOC1-208ENST00000592535 PABPC3Q9H361 631 aaKnown RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 C6orf106Q9H6K1 298 aaPredicted RBP14.29□□□□□ -0.12
APOC1-208ENST00000592535 A0A1B0GTW7 788 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
APOC1-208ENST00000592535 ARHGAP33O14559 1287 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 PLXNA2O75051 1894 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 CLDN11O75508 207 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 GJB6O95452 261 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 UNGP13051 313 aaPredicted RBP14.28□□□□□ -0.12
APOC1-208ENST00000592535 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
APOC1-208ENST00000592535 CDH4P55283 916 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 OXCT1P55809 520 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 SULT2A1Q06520 285 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 TP53BP1Q12888 1972 aaPredicted RBP14.28□□□□□ -0.12
APOC1-208ENST00000592535 CST6Q15828 149 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 ALFQ53S48 1182 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 SH3PXD2AQ5TCZ1 1133 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 TRIM72Q6ZMU5 477 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 ARCQ7LC44 396 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 FAM131BQ86XD5 332 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 STK40Q8N2I9 435 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 MINDY1Q8N5J2 469 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 SNX19Q92543 992 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 PTPRN2Q92932 1015 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 FEM1AQ9BSK4 669 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 NAT10Q9H0A0 1025 aaKnown RBP14.28□□□□□ -0.12
APOC1-208ENST00000592535 BTBD1Q9H0C5 482 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 RAB6CQ9H0N0 254 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 PCED1AQ9H1Q7 454 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 EIF2B4Q9UI10 523 aaKnown RBP14.28□□□□□ -0.12
APOC1-208ENST00000592535 TBC1D30Q9Y2I9 924 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 PAXBP1Q9Y5B6 917 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 OR51B4Q9Y5P0 310 aa14.28□□□□□ -0.12
APOC1-208ENST00000592535 TMEM131Q92545 1883 aa14.27□□□□□ -0.12
APOC1-208ENST00000592535 MID1O15344 667 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 TEX33O43247 280 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 RNASEH1O60930 286 aaKnown RBP14.27□□□□□ -0.13
APOC1-208ENST00000592535 SEMA4FO95754 770 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 SYPP08247 313 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 VAV1P15498 845 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 CSRP1P21291 193 aaKnown RBP14.27□□□□□ -0.13
APOC1-208ENST00000592535 NNMTP40261 264 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 PSMD8P48556 350 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 ATP11AP98196 1134 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 PTP4A2Q12974 167 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 ARTNQ5T4W7 220 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 USP30Q70CQ3 517 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 MMAAQ8IVH4 418 aaKnown RBP14.27□□□□□ -0.13
APOC1-208ENST00000592535 DEFB124Q8NES8 71 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 GANCQ8TET4 914 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 RXFP2Q8WXD0 754 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 C1orf74Q96LT6 269 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 BPIFA3Q9BQP9 254 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 SGK2Q9HBY8 427 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 FBXL12Q9NXK8 326 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 MPP6Q9NZW5 540 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 SERGEFQ9UGK8 458 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 SLC25A13Q9UJS0 675 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 VPS28Q9UK41 221 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 SCML1Q9UN30 329 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 NCKAP1Q9Y2A7 1128 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.27□□□□□ -0.13
APOC1-208ENST00000592535 SLCO1B1Q9Y6L6 691 aa14.27□□□□□ -0.13
APOC1-208ENST00000592535 A0A1W2PP55 124 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 DRGXA6NNA5 263 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms