RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 STIM2Q9P246 746 aa22.15■■□□□ 1.14
R3HDM4-206ENST00000590454 IP6K2Q9UHH9 426 aa22.15■■□□□ 1.14
R3HDM4-206ENST00000590454 VANGL2Q9ULK5 521 aa22.15■■□□□ 1.14
R3HDM4-206ENST00000590454 PAXBP1Q9Y5B6 917 aa22.15■■□□□ 1.14
R3HDM4-206ENST00000590454 KIAA1549LQ6ZVL6 1849 aa22.15■■□□□ 1.14
R3HDM4-206ENST00000590454 LNP1A1A4G5 178 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 MYO1FO00160 1098 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 KHNYNO15037 678 aaKnown RBP22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 CACNG3O60359 315 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 TULP3O75386 442 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 SPINK2P20155 84 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 CSRP1P21291 193 aaKnown RBP22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 IL1R2P27930 398 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 KDSRQ06136 332 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 PIGHQ14442 188 aaPredicted RBP22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 DMC1Q14565 340 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 TCEAL1Q15170 157 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 CA9Q16790 459 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 TXNRD3NBQ6F5E7 133 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 C11orf74Q86VG3 221 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 PHTF2Q8N3S3 785 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 WFDC5Q8TCV5 224 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 NTAN1Q96AB6 310 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 ACDQ96AP0 544 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 ZNF830Q96NB3 372 aaPredicted RBP22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 HAPLN3Q96S86 360 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 DDX50Q9BQ39 737 aaKnown RBP22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 TMEM121BQ9BXQ6 578 aaPredicted RBP22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 TMEM9BQ9NQ34 198 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 TRIM10Q9UDY6 481 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 FZD10Q9ULW2 581 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 SPAG17Q6Q759 2223 aa22.14■■□□□ 1.13
R3HDM4-206ENST00000590454 F5H5T6 163 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 RNF8O76064 485 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 PROSCO94903 275 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 CISD3P0C7P0 127 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 HOXB3P14651 431 aaPredicted RBP22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 VAV2P52735 878 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 MESDQ14696 234 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 ACAP1Q15027 740 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 SLFN11Q7Z7L1 901 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 RHOT2Q8IXI1 618 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 CCDC112Q8NEF3 446 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 CD101Q93033 1021 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 KCNF1Q9H3M0 494 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 DNAJC17Q9NVM6 304 aaKnown RBP22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 ADGRG1Q9Y653 693 aa22.13■■□□□ 1.13
R3HDM4-206ENST00000590454 ARHGAP6O43182 974 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 IPO7O95373 1038 aaKnown RBP22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 CYBBP04839 570 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 DGKEP52429 567 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 SCAPQ12770 1279 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 ARL13BQ3SXY8 428 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 USP39Q53GS9 565 aaKnown RBP22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 HJURPQ8NCD3 748 aaPredicted RBP22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 C1orf74Q96LT6 269 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 RPRD1AQ96P16 312 aaPredicted RBP22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 SNRNP25Q9BV90 132 aaKnown RBP22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 TMEM51Q9NW97 253 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 FBXO10Q9UK96 956 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 FAM208BQ5VWN6 2430 aa22.12■■□□□ 1.13
R3HDM4-206ENST00000590454 E9PAM4 449 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 PJA2O43164 708 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 SRGAP2O75044 1071 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 CNTN5O94779 1100 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 PCK1P35558 622 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 NOP2P46087 812 aaKnown RBP22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 TAS2R40P59535 323 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 KRT83P78385 493 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 SLC25A11Q02978 314 aaKnown RBP22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 C5orf22Q49AR2 442 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 ALFQ53S48 1182 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 MANEALQ5VSG8 457 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 PMS2CLQ68D20 193 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 KIAA1328Q86T90 577 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 CCDC26Q8TAB7 109 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 PNKPQ96T60 521 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 SCNM1Q9BWG6 230 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 OSBPL2Q9H1P3 480 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 GOLPH3Q9H4A6 298 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 ZWILCHQ9H900 591 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 LUC7LQ9NQ29 371 aaKnown RBP22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 MPP6Q9NZW5 540 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 OR12D3Q9UGF7 316 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 NEU3Q9UQ49 428 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 HYOU1Q9Y4L1 999 aa22.11■■□□□ 1.13
R3HDM4-206ENST00000590454 CDX4O14627 284 aaPredicted RBP22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 BUB1O43683 1085 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 PRPSAP2O60256 369 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 TOP3BO95985 862 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 DESP17661 470 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 MTA1Q13330 715 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 SMTNL2Q2TAL5 461 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 FSCBQ5H9T9 825 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 KCNT1Q5JUK3 1230 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 MPP7Q5T2T1 576 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 CARNMT1Q8N4J0 409 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 TSTD1Q8NFU3 115 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 GATA6Q92908 595 aa22.1■■□□□ 1.13
R3HDM4-206ENST00000590454 XPO6Q96QU8 1125 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms