RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 CCT8L2Q96SF2 557 aa22.82■■□□□ 1.24
CIRBP-208ENST00000586548 PRDM5Q9NQX1 630 aaPredicted RBP22.82■■□□□ 1.24
CIRBP-208ENST00000586548 DONSONQ9NYP3 566 aa22.82■■□□□ 1.24
CIRBP-208ENST00000586548 MAGED2Q9UNF1 606 aaPredicted RBP22.82■■□□□ 1.24
CIRBP-208ENST00000586548 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
CIRBP-208ENST00000586548 DOCK4Q8N1I0 1966 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 SLC12A8A0AV02 714 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 SDR42E2A6NKP2 422 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 TLR5O60602 858 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 RHOQP17081 205 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 STEAP4Q687X5 459 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 FAM117BQ6P1L5 589 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 CCNJLQ8IV13 435 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 ZNF461Q8TAF7 563 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 AGAP3Q96P47 875 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 SLC39A8Q9C0K1 460 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 NKIRAS1Q9NYS0 192 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 MPP6Q9NZW5 540 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 SMG5Q9UPR3 1016 aaKnown RBP22.81■■□□□ 1.24
CIRBP-208ENST00000586548 MRPL42Q9Y6G3 142 aaKnown RBP22.81■■□□□ 1.24
CIRBP-208ENST00000586548 IKBKGQ9Y6K9 419 aa22.81■■□□□ 1.24
CIRBP-208ENST00000586548 IGLV3-10A0A075B6K4 115 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 PRPF4O43172 522 aaKnown RBP eCLIP22.8■■□□□ 1.242e-6■■■□□ 15.5
CIRBP-208ENST00000586548 JCHAINP01591 159 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 RAG1P15918 1043 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 SLC18A1P54219 525 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 SNX30Q5VWJ9 437 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 NUGGCQ68CJ6 796 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 NECAB2Q7Z6G3 386 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 TMCO2Q7Z6W1 182 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-208ENST00000586548 PRPF39Q86UA1 669 aaKnown RBP22.8■■□□□ 1.24
CIRBP-208ENST00000586548 TMEM199Q8N511 208 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 ZNF473Q8WTR7 871 aaKnown RBP22.8■■□□□ 1.24
CIRBP-208ENST00000586548 SMC6Q96SB8 1091 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 NAT9Q9BTE0 207 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 ZYG11BQ9C0D3 744 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 CCSER2Q9H7U1 834 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 SSU72Q9NP77 194 aaKnown RBP22.8■■□□□ 1.24
CIRBP-208ENST00000586548 SPG21Q9NZD8 308 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 VANGL2Q9ULK5 521 aa22.8■■□□□ 1.24
CIRBP-208ENST00000586548 HBS1LQ9Y450 684 aaKnown RBP22.8■■□□□ 1.24
CIRBP-208ENST00000586548 IQANK1A0A1B0GTG1 560 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 FAM47DPA6NHR8 397 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 ARHGAP42A6NI28 874 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 MAFKO60675 156 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 BAIAP3O94812 1187 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 INHBAP08476 426 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 NFKB1P19838 968 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 MPP2Q14168 576 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 KCTD11Q693B1 232 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 TIGD7Q6NT04 549 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-208ENST00000586548 ARHGAP36Q6ZRI8 547 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 CYS1Q717R9 158 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 ANKRD42Q8N9B4 389 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 MZB1Q8WU39 189 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 CHMP6Q96FZ7 201 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 PRMT1Q99873 361 aaKnown RBP22.79■■□□□ 1.24
CIRBP-208ENST00000586548 NDFIP2Q9NV92 336 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 TMEM248Q9NWD8 314 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 NYNRINQ9P2P1 1898 aaKnown RBP22.79■■□□□ 1.24
CIRBP-208ENST00000586548 MATN3O15232 486 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 PIAS1O75925 651 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 SEC24AO95486 1093 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 CSH1P0DML2 217 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 CSH2P0DML3 217 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 CCNB1P14635 433 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 HNRNPH2P55795 449 aaKnown RBP22.79■■□□□ 1.24
CIRBP-208ENST00000586548 PRPSAP1Q14558 356 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 FOXR1Q6PIV2 292 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 DDX53Q86TM3 631 aaKnown RBP22.79■■□□□ 1.24
CIRBP-208ENST00000586548 SLC26A11Q86WA9 606 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 LRRC6Q86X45 466 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 KLHDC8BQ8IXV7 354 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 UMODL1-AS1Q8N2C9 162 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 DYDC1Q8WWB3 177 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 SGSM3Q96HU1 749 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 ZNF317Q96PQ6 595 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-208ENST00000586548 IL12RB2Q99665 862 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 ZNF180Q9UJW8 692 aa22.79■■□□□ 1.24
CIRBP-208ENST00000586548 PSMD3O43242 534 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 URODP06132 367 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 PGAM1P18669 254 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 MGAT1P26572 445 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 CCT5P48643 541 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 NDST2P52849 883 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 SESN2P58004 480 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-208ENST00000586548 MGARPQ8TDB4 240 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 MLPHQ9BV36 600 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-208ENST00000586548 DNMT3LQ9UJW3 386 aa22.78■■□□□ 1.24
CIRBP-208ENST00000586548 A0A1W2PPM1 405 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 FAM159BA6NKW6 160 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 CACNG3O60359 315 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 HMBSP08397 361 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 SPARCL1Q14515 664 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 CASC4Q6P4E1 433 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 CNTD1Q8N815 330 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 ARNTL2Q8WYA1 636 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 LRRC40Q9H9A6 602 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 KIF9Q9HAQ2 790 aa22.77■■□□□ 1.24
CIRBP-208ENST00000586548 CASS4Q9NQ75 786 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms