RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 EXOC2Q96KP1 924 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 ZNF395Q9H8N7 513 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 DNAJC16Q9Y2G8 782 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CCL22O00626 93 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 PAMP19021 973 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CTGFP29279 349 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 PRSS55Q6UWB4 352 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 KCNMB4Q86W47 210 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 LONP2Q86WA8 852 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CCDC124Q96CT7 223 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CYP4F12Q9HCS2 524 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 TBC1D13Q9NVG8 400 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CKBP12277 381 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 PGAM1P18669 254 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 OR1E1P30953 314 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 BST1Q10588 318 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 CTBP1Q13363 440 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 XRCC4Q13426 336 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 CRYMQ14894 314 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 ATP6V0D2Q8N8Y2 350 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 CASP10Q92851 521 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 CERS2Q96G23 380 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 FBXO6Q9NRD1 293 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 KANSL3Q9P2N6 904 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 TM9SF1O15321 606 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 PTPN3P26045 913 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 UPP1Q16831 310 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 PAQR9Q6ZVX9 377 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 CAND1Q86VP6 1230 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 RFWD2Q8NHY2 731 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 ARHGEF38Q9NXL2 777 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 RRN3Q9NYV6 651 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 HCSTQ9UBK5 93 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 CDY1Q9Y6F8 540 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 GOLGA8QA0A0J9YX86 632 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 GOLGA8OA6NCC3 632 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 C5orf60A6NFR6 353 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 GOLGA8NF8WBI6 632 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 GCATO75600 419 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 LYPLA1O75608 230 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 ANXA9O76027 345 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 SPATA31D3P0C874 917 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 OR1D2P34982 312 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 GP5P40197 560 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 PGGT1BP53609 377 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 NAA25Q14CX7 972 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 ANO4Q32M45 955 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 SPATA31D4Q6ZUB0 917 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 LRRC8DQ7L1W4 858 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 C16orf59Q7L2K0 433 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 LGI2Q8N0V4 545 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 FITM2Q8N6M3 262 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 SERPINB11Q96P15 392 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 MUC3BQ9H195 1237 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 TEX264Q9Y6I9 313 aa12.72□□□□□ -0.37
SMARCA4-208ENST00000585799 A0A096LPK6 155 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 NCAM2O15394 837 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 DNAJC6O75061 913 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 CABYRO75952 493 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 ASMTLO95671 621 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 CDH17Q12864 832 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 ARHGAP36Q6ZRI8 547 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 ZMIZ2Q8NF64 920 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 VPS39Q96JC1 886 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 ZNF358Q9NW07 568 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 DDHD2O94830 711 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 CHRNA4P43681 627 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 DLG2Q15700 870 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 PKDCCQ504Y2 493 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 TEX44Q53QW1 395 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 ALKAL1Q6UXT8 129 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 DCAKDQ8WVC6 231 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 LRRC39Q96DD0 335 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 AGAP2Q99490 1192 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 NAT9Q9BTE0 207 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 FBXO44Q9H4M3 255 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
SMARCA4-208ENST00000585799 B2RBV5 119 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 CBX4O00257 560 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 TP73O15350 636 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 EDF1O60869 148 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 GPC4O75487 556 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 MT-CO1P00395 513 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 NQO1P15559 274 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 HARS2P49590 506 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 SCNN1BP51168 640 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 VEPH1Q14D04 833 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 CNGA3Q16281 694 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms