RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 C2orf78A6NCI8 922 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 TRAPPC3O43617 180 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 ZMPSTE24O75844 475 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 ITGAVP06756 1048 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 GRIK3Q13003 919 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 MORF4L2Q15014 288 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 SLC22A17Q8WUG5 538 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 MARK4Q96L34 752 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 HSFY1Q96LI6 401 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 SLC39A8Q9C0K1 460 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 FBXO6Q9NRD1 293 aaPredicted RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 FAM47DPA6NHR8 397 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 TSTA3Q13630 321 aaPredicted RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 PLPP4Q5VZY2 271 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 MYLK4Q86YV6 388 aaPredicted RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 ARL14EPQ8N8R7 260 aaPredicted RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 BBOF1Q8ND07 529 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 ERP27Q96DN0 273 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 SLC22A12Q96S37 553 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 CYTH2Q99418 400 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 IGFLR1Q9H665 355 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 FZD10Q9ULW2 581 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 WDFY4Q6ZS81 3184 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 MOXD2PA6NHM9 499 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 APOEP02649 317 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 ITGB8P26012 769 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 CCR1P32246 355 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 PCK1P35558 622 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 SLC10A7Q0GE19 358 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 STRA8Q7Z7C7 330 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 ARID3BQ8IVW6 561 aaPredicted RBP10.52□□□□□ -0.72
RFFL-212ENST00000584655 SKA2Q8WVK7 121 aaPredicted RBP10.52□□□□□ -0.72
RFFL-212ENST00000584655 PTPRN2Q92932 1015 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 PSMC3IPQ9P2W1 217 aaPredicted RBP10.52□□□□□ -0.72
RFFL-212ENST00000584655 PCDHGC4Q9Y5F7 938 aa10.52□□□□□ -0.72
RFFL-212ENST00000584655 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 AURKAO14965 403 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 RFPL2O75678 378 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 DGKIO75912 1065 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 HSPA1AP0DMV8 641 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 HSPA1BP0DMV9 641 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 IL9RQ01113 521 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 KDSRQ06136 332 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 CHI3L2Q15782 390 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 VWA5B1Q5TIE3 1220 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 CAND1Q86VP6 1230 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 ESAMQ96AP7 390 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 CORO1BQ9BR76 489 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 BFARQ9NZS9 450 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 IPO11Q9UI26 975 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 NMBRP28336 390 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 STIP1P31948 543 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 CDH5P33151 784 aaPredicted RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 PAPOLAP51003 745 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 ALDH18A1P54886 795 aaKnown RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 NME5P56597 212 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 SLC12A1Q13621 1099 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 PDK1Q15118 436 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 PDK2Q15119 407 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 CLUL1Q15846 466 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 PKDCCQ504Y2 493 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 SCD5Q86SK9 330 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 ANKS4BQ8N8V4 417 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 NAT8LQ8N9F0 302 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 STMN4Q9H169 189 aaPredicted RBP10.52□□□□□ -0.73
RFFL-212ENST00000584655 GDAP2Q9NXN4 497 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 GRID1Q9ULK0 1009 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 NUMA1Q14980 2115 aa10.52□□□□□ -0.73
RFFL-212ENST00000584655 PRR23AA6NEV1 266 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 PPP1R12AO14974 1030 aaPredicted RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 UBOX5O94941 541 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 CTPS1P17812 591 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 HDCP19113 662 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 NCF2P19878 526 aaPredicted RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 MPP1Q00013 466 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 RHBDF2Q6PJF5 856 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 POU5F2Q8N7G0 328 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 C12orf76Q8N812 135 aaPredicted RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 HMCESQ96FZ2 354 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 RABGEF1Q9UJ41 708 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 A8MUI8 341 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 CCL16O15467 120 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 SNAP91O60641 907 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 CCNB1P14635 433 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 ARSAP15289 507 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 WARSP23381 471 aaKnown RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 STAT4Q14765 748 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 OTUD1Q5VV17 481 aaPredicted RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 ESRP1Q6NXG1 681 aaKnown RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 TTC7BQ86TV6 843 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms