RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PSMD5Q16401 504 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 RAP1GAP2Q684P5 730 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 PACS1Q6VY07 963 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ARHGAP36Q6ZRI8 547 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 CLNKQ7Z7G1 428 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 LMNTD2Q8IXW0 634 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 TEX9Q8N6V9 391 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 TMA16Q96EY4 203 aaKnown RBP11.55□□□□□ -0.56
TOP3A-217ENST00000584582 SUDS3Q9H7L9 328 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-217ENST00000584582 GJD2Q9UKL4 321 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ACTL7BQ9Y614 415 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 A8MX80 341 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 GP5P40197 560 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 CSE1LP55060 971 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 DAOAP59103 153 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 COG7P83436 770 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 ENPEPQ07075 957 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PARP6Q2NL67 630 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 RABGAP1LQ5R372 815 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 NAPEPLDQ6IQ20 393 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 TRIM67Q6ZTA4 783 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 RNF180Q86T96 592 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 AGGF1Q8N302 714 aaeCLIP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 SNX31Q8N9S9 440 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 DQX1Q8TE96 717 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.563e-7■■■■□ 22.5
TOP3A-217ENST00000584582 MTBPQ96DY7 904 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 HNRNPABQ99729 332 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 OSBPL1AQ9BXW6 950 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 NUF2Q9BZD4 464 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 IL1RL2Q9HB29 575 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 STARD7Q9NQZ5 370 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 ARHGEF38Q9NXL2 777 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PHIPQ8WWQ0 1821 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 BCLAF3A2AJT9 711 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 NCF1BA6NI72 391 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 NCF1CA8MVU1 366 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PAGE1O75459 146 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 DNAJC8O75937 253 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 ATP5HO75947 161 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 NCF1P14598 390 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 CCNB1P14635 433 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 RPL17P18621 184 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 BNIP1Q12981 228 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 DPYSL2Q16555 572 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 TCHHL1Q5QJ38 904 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 STRADAQ7RTN6 431 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 CYP2S1Q96SQ9 504 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 NFKBIZQ9BYH8 718 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 GABBR2O75899 941 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 F9P00740 461 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 CCND3P30281 292 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PTPN9P43378 593 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 OCRLQ01968 901 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 ART3Q13508 389 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 ANO4Q32M45 955 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PSTKQ8IV42 348 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 DENND6AQ8IWF6 608 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PPHLN1Q8NEY8 458 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 KCTD4Q8WVF5 259 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 TEKT4Q8WW24 435 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 WDR55Q9H6Y2 383 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 PPCSQ9HAB8 311 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 UTP6Q9NYH9 597 aaKnown RBP11.54□□□□□ -0.56
TOP3A-217ENST00000584582 TMEM216Q9P0N5 145 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 FZD10Q9ULW2 581 aa11.54□□□□□ -0.56
TOP3A-217ENST00000584582 A0A1W2PQH9 124 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PRR5-ARHGAP8B1AHC4 643 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PIRO00625 290 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PRPF4O43172 522 aaKnown RBP eCLIP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 GLRA3O75311 464 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PGAM1P18669 254 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 SLC5A3P53794 718 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ARHGAP8P85298 464 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 RFWD3Q6PCD5 774 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 VPS39Q96JC1 886 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ADA2Q9NZK5 511 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 IPO11Q9UI26 975 aaKnown RBP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PLA2G4CQ9UP65 541 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PLLPQ9Y342 182 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PCDHA11Q9Y5I1 949 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 FBXO21O94952 628 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 GABRB2P47870 512 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 XRCC4Q13426 336 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ITGA7Q13683 1181 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 TOP6BLQ8N6T0 577 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ANKRD12Q6UB98 2062 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 DOCK3Q8IZD9 2030 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 GIPC1O14908 333 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 DAB1O75553 588 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 RASSF9O75901 435 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms