RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	PNMA6A	P0CW24	399 aa	Predicted RBP	12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GRK6	P43250	576 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	IRAK1	P51617	712 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ADPRH	P54922	357 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CLDN6	P56747	220 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PPP2CB	P62714	309 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RACK1	P63244	317 aa	Known RBP	12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PPP2CA	P67775	309 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CDK17	Q00537	523 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	NME3	Q13232	169 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CAMK4	Q16566	473 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FOXR2	Q6PJQ5	311 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	LRSAM1	Q6UWE0	723 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	BEND5	Q7L4P6	421 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CCAR2	Q8N163	923 aa	Known RBP	12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	WDTC1	Q8N5D0	677 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OR2T34	Q8NGX1	318 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	STK32A	Q8WU08	396 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PTPRN2	Q92932	1015 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PLCB1	Q9NQ66	1216 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	AJAP1	Q9UKB5	411 aa	Predicted RBP	12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SCML1	Q9UN30	329 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ITIH6	Q6UXX5	1313 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CABIN1	Q9Y6J0	2220 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CACNA1G	O43497	2377 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DSP	P15924	2871 aa	Known RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3D	A0A087WVF3	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3I	A0A087WXS9	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3E	A0A087X179	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3K	A0A087X1G2	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3L	B9A6J9	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	VILL	O15195	856 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TNFSF14	O43557	240 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	BNIP3L	O60238	219 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FGFR1OP	O95684	399 aa	Known RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ADH1B	P00325	375 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3H	P0C7X1	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ABCB4	P21439	1286 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MAT2A	P31153	395 aa	Known RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	COL9A2	Q14055	689 aa	Predicted RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ACCSL	Q4AC99	568 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3G	Q6DHY5	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OR6B2	Q6IFH4	312 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3C	Q6IPX1	549 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FBXL22	Q6P050	247 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DHRS13	Q6UX07	377 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM183BP	Q6ZVS7	135 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ENOSF1	Q7L5Y1	443 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TMPRSS7	Q7RTY8	843 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KDM1B	Q8NB78	822 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	C1orf131	Q8NDD1	294 aa	Known RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OR52K2	Q8NGK3	314 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SERAC1	Q96JX3	654 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PPP1R13B	Q96KQ4	1090 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RPRD1A	Q96P16	312 aa	Predicted RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PRMT1	Q99873	361 aa	Known RBP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FTSJ1	Q9UET6	329 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ADAMTS1	Q9UHI8	967 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC12A6	Q9UHW9	1150 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	VANGL2	Q9ULK5	521 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RAX	Q9Y2V3	346 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GPSM3	Q9Y4H4	160 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ZFYVE26	Q68DK2	2539 aa		11.99	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		A0A1B0GTQ1	180 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		A0A1B0GVM2	712 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TCAF2	A6NFQ2	919 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PCDHGA12	O60330	932 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RTN2	O75298	545 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DKK1	O94907	266 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ERBB2	P04626	1255 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GOT1	P17174	413 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	C5AR1	P21730	350 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CD38	P28907	300 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CCR1	P32246	355 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DRD3	P35462	400 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	NNMT	P40261	264 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MTIF2	P46199	727 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SFSWAP	Q12872	951 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DNAJC3	Q13217	504 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	AUH	Q13825	339 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ELAVL3	Q14576	367 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ARID5B	Q14865	1188 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SHB	Q15464	509 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MEA1	Q16626	185 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	EXOC3L4	Q17RC7	722 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	COL28A1	Q2UY09	1125 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RABGAP1L	Q5R372	815 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CXorf57	Q6NSI4	855 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GBP6	Q6ZN66	633 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	C14orf80	Q86SX3	495 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FRS2	Q8WU20	508 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC2A13	Q96QE2	648 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ELF4	Q99607	663 aa	Predicted RBP	11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms