RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 NAPEPLDQ6IQ20 393 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 MMS22LQ6ZRQ5 1243 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 DSG4Q86SJ6 1040 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 CHSY1Q86X52 802 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 LGI2Q8N0V4 545 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 FMR1NBQ8N0W7 255 aaPredicted RBP10.62□□□□□ -0.71
GGA3-210ENST00000580799 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 STK40Q8N2I9 435 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 EID2Q8N6I1 236 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 OR14C36Q8NHC7 312 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 PTPRN2Q92932 1015 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 SMARCE1Q969G3 411 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 FAM131CQ96AQ9 280 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 MYEOVQ96EZ4 313 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 DHTKD1Q96HY7 919 aaPredicted RBP10.62□□□□□ -0.71
GGA3-210ENST00000580799 CEP63Q96MT8 703 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 PPP1R9BQ96SB3 815 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 NRSN2Q9GZP1 204 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.62□□□□□ -0.71
GGA3-210ENST00000580799 TJP2Q9UDY2 1190 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 SLCO3A1Q9UIG8 710 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 NAALADL1Q9UQQ1 740 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 DMTF1Q9Y222 760 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 LOC400499M0QZD8 3231 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 CELSR3Q9NYQ7 3312 aa10.62□□□□□ -0.71
GGA3-210ENST00000580799 KNL1Q8NG31 2342 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3DA0A087WVF3 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3IA0A087WXS9 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3EA0A087X179 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3KA0A087X1G2 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 A0A1B0GVM2 712 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TRIM49BA6NDI0 452 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3FA6NER0 549 aaPredicted RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 TCAF2A6NFQ2 919 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 KCNU1A8MYU2 1149 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3LB9A6J9 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 F5H5T6 163 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TK2O00142 265 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 RRP8O43159 456 aaKnown RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3HP0C7X1 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 SLC2A3P11169 496 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TACR2P21452 398 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 EIF2S3P41091 472 aaKnown RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 GPD2P43304 727 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 PLK1P53350 603 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 YWHAZP63104 245 aaKnown RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 DNAJC3Q13217 504 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 MTA1Q13330 715 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 CCDC40Q4G0X9 1142 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 HES3Q5TGS1 186 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 FAM46CQ5VWP2 391 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 SYPL2Q5VXT5 272 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 RAP1GAP2Q684P5 730 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3GQ6DHY5 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3CQ6IPX1 549 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 FBXL19Q6PCT2 694 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 FOXR2Q6PJQ5 311 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 PRPF39Q86UA1 669 aaKnown RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 TAC4Q86UU9 113 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 TBC1D3Q8IZP1 549 aaPredicted RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 APCDD1Q8J025 514 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 ATP6V0D2Q8N8Y2 350 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 LMO3Q8TAP4 145 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 ADAM32Q8TC27 787 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 BAP1Q92560 729 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 KAT5Q92993 513 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 RPL10LQ96L21 214 aaKnown RBP10.61□□□□□ -0.71
GGA3-210ENST00000580799 MED15Q96RN5 788 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 THAP9Q9H5L6 903 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 POPDC2Q9HBU9 364 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 CNTN6Q9UQ52 1028 aa10.61□□□□□ -0.71
GGA3-210ENST00000580799 URB1O60287 2271 aaKnown RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 CBX4O00257 560 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 WNT9AO14904 365 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 ALOX15BO15296 676 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 MED7O43513 233 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 PLRG1O43660 514 aaKnown RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 TRUB2O95900 331 aaKnown RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 IGLV3-25P01717 112 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 CKMT2P17540 419 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 DRD3P35462 400 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 STK19P49842 368 aaPredicted RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 SEMG2Q02383 582 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 TARDBPQ13148 414 aaKnown RBP eCLIP10.6□□□□□ -0.71
GGA3-210ENST00000580799 SETMARQ53H47 684 aaPredicted RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 ZC3H12AQ5D1E8 599 aaKnown RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 RABGAP1LQ5R372 815 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.6□□□□□ -0.71
GGA3-210ENST00000580799 RRAGAQ7L523 313 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 KANSL1Q7Z3B3 1105 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 TMEM110Q86TL2 294 aa10.6□□□□□ -0.71
GGA3-210ENST00000580799 TRIM69Q86WT6 500 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms