RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 OR1E1P30953 314 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RFC1P35251 1148 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 PTGER3P43115 390 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 STK19P49842 368 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 COPAP53621 1224 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 PTP4A2Q12974 167 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CCDC14Q49A88 953 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 FIGNQ5HY92 759 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 C6orf118Q5T5N4 469 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 TCEAL6Q6IPX3 200 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CXorf57Q6NSI4 855 aaKnown RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RWDD4Q6NW29 188 aaKnown RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 STRADAQ7RTN6 431 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 IRF2BP2Q7Z5L9 587 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 C14orf80Q86SX3 495 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RGL4Q8IZJ4 473 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RNF214Q8ND24 703 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 NETO1Q8TDF5 533 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CPLX3Q8WVH0 158 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 SNX19Q92543 992 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 TCEAL3Q969E4 200 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 ZNF653Q96CK0 615 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RMDN1Q96DB5 314 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 TOE1Q96GM8 510 aaKnown RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 LMLNQ96KR4 655 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RPL10LQ96L21 214 aaKnown RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 HAPLN3Q96S86 360 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 EDEM2Q9BV94 578 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 C2orf49Q9BVC5 232 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 PRSS16Q9NQE7 514 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 ANLNQ9NQW6 1124 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 MPP6Q9NZW5 540 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 USP36Q9P275 1121 aaKnown RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CHD5Q8TDI0 1954 aa11.21□□□□□ -0.62
NDEL1-208ENST00000580237 CFAP54Q96N23 3096 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SIGLEC16A6NMB1 481 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 TTC34A8MYJ7 566 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 KHNYNO15037 678 aaKnown RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 CCP110O43303 1012 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 BNIP3LO60238 219 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SIN3BO75182 1162 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 CNTN5O94779 1100 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SKILP12757 684 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 KCNA4P22459 653 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 TGM1P22735 817 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 OXTRP30559 389 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 PRKCIP41743 596 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 PSMD8P48556 350 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 TPMTP51580 245 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 KRT83P78385 493 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 ZNF33AQ06730 810 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 PUM1Q14671 1186 aaKnown RBP eCLIP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 ACCSLQ4AC99 568 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 ALFQ53S48 1182 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SPDYCQ5MJ68 293 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SYCP2LQ5T4T6 812 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SH3PXD2AQ5TCZ1 1133 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 E4F1Q66K89 784 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SCYL2Q6P3W7 929 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 WDR59Q6PJI9 974 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 ZNF571Q7Z3V5 609 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 SYT12Q8IV01 421 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 DRC7Q8IY82 874 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 KDM1BQ8NB78 822 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 TRIM11Q96F44 468 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 MRGPRX3Q96LB0 322 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 GPR174Q9BXC1 333 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 NUSAP1Q9BXS6 441 aaKnown RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 ZYG11BQ9C0D3 744 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 MTG2Q9H4K7 406 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 PARVAQ9NVD7 372 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 TAS2R14Q9NYV8 317 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 AIPL1Q9NZN9 384 aa11.2□□□□□ -0.62
NDEL1-208ENST00000580237 LUC7L2Q9Y383 392 aaKnown RBP11.2□□□□□ -0.62
NDEL1-208ENST00000580237 CACNA1EQ15878 2313 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ITIH6Q6UXX5 1313 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 A0A1W2PQJ5 194 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 I6L893 689 aaPredicted RBP11.19□□□□□ -0.62
NDEL1-208ENST00000580237 TPM1P09493 284 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ITPKAP23677 461 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 PSMA2P25787 234 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ADRA1BP35368 520 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ZNF143P52747 638 aaPredicted RBP11.19□□□□□ -0.62
NDEL1-208ENST00000580237 HDAC4P56524 1084 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 RPS14P62263 151 aaKnown RBP11.19□□□□□ -0.62
NDEL1-208ENST00000580237 RPL7AP62424 266 aaKnown RBP11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ZBED6P86452 979 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 SFSWAPQ12872 951 aaKnown RBP11.19□□□□□ -0.62
NDEL1-208ENST00000580237 ELAVL3Q14576 367 aaKnown RBP11.19□□□□□ -0.62
NDEL1-208ENST00000580237 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
NDEL1-208ENST00000580237 RAB6CQ53S08 254 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms