RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 FOSL1P15407 271 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GOT1P17174 413 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 IFNAR1P17181 557 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ITIH1P19827 911 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 RPA1P27694 616 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CDC25AP30304 524 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SLC8A1P32418 973 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NOS2P35228 1153 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CHKAP35790 457 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ATP5C1P36542 298 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NUDT1P36639 197 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ETV5P41161 510 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PNPLA4P41247 253 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PLA2G4AP47712 749 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 RPIAP49247 311 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NASPP49321 788 aaPredicted RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SMTNP53814 917 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 HDAC4P56524 1084 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ZNF445P59923 1031 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 HNRNPKP61978 463 aaKnown RBP eCLIP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PPP2CBP62714 309 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PPP2CAP67775 309 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CCL7P80098 99 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NUCB2P80303 420 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 EHHADHQ08426 723 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GOLGA8FQ08AF8 430 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GOLGA8DPQ0D2H9 430 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 TRIM29Q14134 588 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 FGL2Q14314 439 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 DRAP1Q14919 205 aaPredicted RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NECTIN1Q15223 517 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 RBBP5Q15291 538 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NR0B2Q15466 257 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MAPRE1Q15691 268 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 INPP5JQ15735 1006 aaPredicted RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NPY5RQ15761 445 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CST6Q15828 149 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CALCRLQ16602 461 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 KLHL40Q2TBA0 621 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 DEFB133Q30KQ1 61 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CCDC92Q53HC0 331 aaPredicted RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MFSD4BQ5TF39 518 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CREB3L3Q68CJ9 461 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 C16orf87Q6PH81 154 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MYO7BQ6PIF6 2116 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PIK3AP1Q6ZUJ8 805 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 TAOK1Q7L7X3 1001 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 HS2ST1Q7LGA3 356 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GDF7Q7Z4P5 450 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MMAAQ8IVH4 418 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PDZD8Q8NEN9 1154 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 VPS37AQ8NEZ2 397 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 OR6B3Q8NGW1 331 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SCAMP5Q8TAC9 235 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MYCBPAPQ8TBZ2 947 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MIPOL1Q8TD10 442 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GPBAR1Q8TDU6 330 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 DDI1Q8WTU0 396 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SREK1Q8WXA9 508 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 OVCA2Q8WZ82 227 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GLMNQ92990 594 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 NAT6Q93015 286 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MYLPFQ96A32 169 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 TMEM159Q96B96 161 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 HDAC11Q96DB2 347 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 IFT43Q96FT9 208 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 BICD1Q96G01 975 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 PCED1BQ96HM7 432 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MPP4Q96JB8 637 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SLC45A3Q96JT2 553 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ZNF396Q96N95 335 aaPredicted RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 TMEM74Q96NL1 305 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 GFM1Q96RP9 751 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 FAM129BQ96TA1 746 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 IL12RB2Q99665 862 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CMKLR1Q99788 373 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ARPC5LQ9BPX5 153 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CCDC3Q9BQI4 270 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SYT15Q9BQS2 421 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 TMUB1Q9BVT8 246 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SLC2A11Q9BYW1 496 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 B3GNT4Q9C0J1 378 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 BHMT2Q9H2M3 363 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 MTG2Q9H4K7 406 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ASB7Q9H672 318 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 SYNDIG1Q9H7V2 258 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 C17orf75Q9HAS0 396 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 ZSWIM6Q9HCJ5 1215 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CRTAC1Q9NQ79 661 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 IRAK4Q9NWZ3 460 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 DNAJC28Q9NX36 388 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 OGFRQ9NZT2 677 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CCDC39Q9UFE4 941 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 USP25Q9UHP3 1055 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CYTH4Q9UIA0 394 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 KCND3Q9UK17 655 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CPSF3Q9UKF6 684 aaKnown RBP2.52□□□□□ -2.01
SNORD53-201ENST00000579969 CDH9Q9ULB4 789 aa2.52□□□□□ -2.01
SNORD53-201ENST00000579969 FZD4Q9ULV1 537 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms