RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PDZD8Q8NEN9 1154 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 ST13P5Q8NFI4 369 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 JOSD2Q8TAC2 188 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 BAHD1Q8TBE0 780 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 RSAD2Q8WXG1 361 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 CPA5Q8WXQ8 436 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 MYEOVQ96EZ4 313 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC39A13Q96H72 371 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC120Q96HB5 630 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 PPP1R13BQ96KQ4 1090 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 FCRL2Q96LA5 508 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF512Q96ME7 567 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 SPAG5Q96R06 1193 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 UCN2Q96RP3 112 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 CYP2S1Q96SQ9 504 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 NPY6RQ99463 290 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 MED10Q9BTT4 135 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 PACSIN1Q9BY11 444 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM7Q9C029 511 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM5Q9C035 493 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 HPS4Q9NQG7 708 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 ASNSD1Q9NWL6 643 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 GDE1Q9NZC3 331 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 CHORDC1Q9UHD1 332 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 STOML2Q9UJZ1 356 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGAP26Q9UNA1 814 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 NEU3Q9UQ49 428 aa3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 LUC7L2Q9Y383 392 aaKnown RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 MRPS23Q9Y3D9 190 aaKnown RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 ZFP37Q9Y6Q3 630 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-215ENST00000578995 LRP4O75096 1905 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TMEM131Q92545 1883 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 A0A0U1RQJ8 604 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM170AA1A519 330 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 C2CD4BA6NLJ0 364 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF197O14709 1029 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 IRAK2O43187 625 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 NARSO43776 548 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TLR5O60602 858 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM13O60858 407 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 STC2O76061 302 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 FBXO21O94952 628 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 FGF19O95750 216 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 LTFP02788 710 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CYP1A2P05177 515 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ASGR2P07307 311 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 GZMAP12544 262 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 RARGP13631 454 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 LCP1P13796 627 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 RRM1P23921 792 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 DDX6P26196 483 aaKnown RBP eCLIP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ANXA13P27216 316 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 EIF4A3P38919 411 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 USP8P40818 1118 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ACADSBP45954 432 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 PPP3CCP48454 512 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 RPL7AP62424 266 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CCZ1BP86790 482 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CCZ1P86791 482 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC6A3Q01959 620 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ARID5AQ03989 594 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 GFPT1Q06210 699 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 KLHL30Q0D2K2 578 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TCEAL1Q15170 157 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 POU4F3Q15319 338 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC18A3Q16572 532 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 BSPRYQ5W0U4 402 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 NADSYN1Q6IA69 706 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 OTOP3Q7RTS5 596 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CACNA2D4Q7Z3S7 1137 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TAC4Q86UU9 113 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CPNE8Q86YQ8 564 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TMEM151BQ8IW70 566 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC44A3Q8N4M1 653 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 KIAA1958Q8N8K9 716 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ARL14EPQ8N8R7 260 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 MAB21L3Q8N8X9 362 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TDRD5Q8NAT2 981 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TMEM35BQ8NCS4 154 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 C3orf20Q8ND61 904 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 OR8K1Q8NGG5 319 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 DQX1Q8TE96 717 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CPLX3Q8WVH0 158 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ATRIPQ8WXE1 791 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 EDEM1Q92611 657 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 CENPIQ92674 756 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 SMARCD2Q92925 531 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 FBXO32Q969P5 355 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ELSPBP1Q96BH3 223 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGEF26Q96DR7 871 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 PGAP3Q96FM1 320 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 SLITRK1Q96PX8 696 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 PANX2Q96RD6 677 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 PRMT1Q99873 361 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 C11orf70Q9BRQ4 267 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 DDX23Q9BUQ8 820 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 MIS12Q9H081 205 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ATXN3LQ9H3M9 355 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 FBXO44Q9H4M3 255 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 PIDD1Q9HB75 910 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms