RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 FCHO2Q0JRZ9 810 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 ERCC6LQ2NKX8 1250 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 PIK3R6Q5UE93 754 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 MANEALQ5VSG8 457 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 HTR3DQ70Z44 454 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 ANKS1BQ7Z6G8 1248 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 BBS7Q8IWZ6 715 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 RTL3Q8N8U3 475 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 CCDC89Q8N998 374 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 BBOF1Q8ND07 529 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 SLC35B2Q8TB61 432 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 OSCP1Q8WVF1 389 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 TFB1MQ8WVM0 346 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 RHOXF2Q9BQY4 288 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 LRRC1Q9BTT6 524 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 ANLNQ9NQW6 1124 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 ARGLU1Q9NWB6 273 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 DUS2Q9NX74 493 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 STOML2Q9UJZ1 356 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 DNPEPQ9ULA0 475 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 KIF26AQ9ULI4 1882 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 DRGXA6NNA5 263 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FAM72CH0Y354 149 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 CHADO15335 359 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 RAD51CO43502 376 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 GREM1O60565 184 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 KLKB1P03952 638 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 ETFBP38117 255 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 NDST2P52849 883 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 CDH4P55283 916 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 ADCY2Q08462 1091 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 TDGQ13569 410 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 C5orf22Q49AR2 442 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FAM72AQ5TYM5 149 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FAM72DQ6L9T8 149 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FBXL22Q6P050 247 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 Q6ZNB5 142 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FAM72BQ86X60 149 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 GJD3Q8N144 294 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 CPXM2Q8N436 756 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 SLC44A3Q8N4M1 653 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 ZNF557Q8N988 423 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 ATG4AQ8WYN0 398 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 OTUB2Q96DC9 234 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 ASIC4Q96FT7 647 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 ZFYVE19Q96K21 471 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 NECAB3Q96P71 396 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 PRMT1Q99873 361 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 HERPUD2Q9BSE4 406 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FAM129AQ9BZQ8 928 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 BRD9Q9H8M2 597 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 FAM114A2Q9NRY5 505 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 HAUS2Q9NVX0 235 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 TMEM248Q9NWD8 314 aa14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 AGO1Q9UL18 857 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 R3HDM2Q9Y2K5 976 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-209ENST00000578904 TTC28Q96AY4 2481 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 BCLAF3A2AJT9 711 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 ARHGAP42A6NI28 874 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 I6L893 689 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 ERLIN1O75477 346 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 CLDN11O75508 207 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 HEXIM1O94992 359 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 OXCT1P55809 520 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 YBEYP58557 167 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 PDGFRLQ15198 375 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 OASLQ15646 514 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 SLC45A4Q5BKX6 768 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 HEATR6Q6AI08 1181 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 TRIM68Q6AZZ1 485 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 TIGD7Q6NT04 549 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 CHST9Q7L1S5 443 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 ZC3H18Q86VM9 953 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 JAMLQ86YT9 394 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 RNF135Q8IUD6 432 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 HJURPQ8NCD3 748 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.29□□□□□ -0.121e-8■■■■■ 51
CSNK1D-209ENST00000578904 ATP2A3Q93084 1043 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 LRRC45Q96CN5 670 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 UHRF1Q96T88 793 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 MAGEB5Q9BZ81 275 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 DTLQ9NZJ0 730 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 MYO18AQ92614 2054 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-209ENST00000578904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 A0A1B0GVM2 712 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 TCAF2A6NFQ2 919 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 TTI1O43156 1089 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 NARSO43776 548 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 NFATC1O95644 943 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 KRT14P02533 472 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 SRFP11831 508 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 ARSAP15289 507 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 PECAM1P16284 738 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 OR1E1P30953 314 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 KCNJ1P48048 391 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms