RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 RNF219Q5W0B1 726 aaPredicted RBP14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 RAP1GAP2Q684P5 730 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 KIAA0895LQ68EN5 471 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 CXorf57Q6NSI4 855 aaKnown RBP14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 FBXL22Q6P050 247 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 DSG4Q86SJ6 1040 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 ZNF677Q86XU0 584 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 OR2T34Q8NGX1 318 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 PTPRN2Q92932 1015 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 SKA1Q96BD8 255 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 ALG14Q96F25 216 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 SPAG5Q96R06 1193 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 FAM129BQ96TA1 746 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 C6orf106Q9H6K1 298 aaPredicted RBP14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 GAREM1Q9H706 876 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 FAM204AQ9H8W3 233 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 TM9SF3Q9HD45 589 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 TM7SF3Q9NS93 570 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 FBXL12Q9NXK8 326 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 STAP1Q9ULZ2 295 aa14.95□□□□□ -0.02
SMARCE1-213ENST00000578044 A0A1W2PPC4 97 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 SH3BP5O60239 455 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 MOCS2O96007 188 aaPredicted RBP14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 IGHV4-34P06331 123 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 USP8P40818 1118 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 GALCP54803 685 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 BNC1Q01954 994 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 AUHQ13825 339 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 HLA-BQ31612 363 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 DPCR1Q3MIW9 517 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 SLC47A2Q86VL8 602 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 CFAP52Q8N1V2 620 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 FRS2Q8WU20 508 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 STK33Q9BYT3 514 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 MIR1-1HGQ9H1L0 117 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 NUP62CLQ9H1M0 184 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 ARHGEF38Q9NXL2 777 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 APOBEC2Q9Y235 224 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 HS3ST2Q9Y278 367 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 PCDHB9Q9Y5E1 797 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 OR51B4Q9Y5P0 310 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 TMEM131Q92545 1883 aa14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 TP53BP1Q12888 1972 aaPredicted RBP14.94□□□□□ -0.02
SMARCE1-213ENST00000578044 PTPRBP23467 1997 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 IGLV3-10A0A075B6K4 115 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 YKT6O15498 198 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 LATO43561 262 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 ERBB2P04626 1255 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 UCHL3P15374 230 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 CYP11B1P15538 503 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 SLC8A1P32418 973 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 CLCN6P51797 869 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 CDH4P55283 916 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 PITX1P78337 314 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 OVGP1Q12889 678 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 TCP11X2Q5H9J9 407 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 FAM46CQ5VWP2 391 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 ZNF783Q6ZMS7 281 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 RBM43Q6ZSC3 357 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 FAM183BPQ6ZVS7 135 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 SND1Q7KZF4 910 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 BNIPLQ7Z465 357 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 SETD3Q86TU7 594 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 IQCHQ86VS3 1027 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 APCDD1Q8J025 514 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 ZNF366Q8N895 744 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 MSANTD4Q8NCY6 345 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 ENOX1Q8TC92 643 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 FEM1AQ9BSK4 669 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 FSCN3Q9NQT6 498 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 SLCO3A1Q9UIG8 710 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 ANKRD6Q9Y2G4 727 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 APC2O95996 2303 aa14.93□□□□□ -0.02
SMARCE1-213ENST00000578044 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 DRGXA6NNA5 263 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 CDK4P11802 303 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 MZF1P28698 734 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 CTSKP43235 329 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 GRK6P43250 576 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 KCNMA1Q12791 1236 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 ZNF177Q13360 481 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 DRAP1Q14919 205 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 KIF19Q2TAC6 998 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 INAVAQ3KP66 663 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 OR6B2Q6IFH4 312 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 LRSAM1Q6UWE0 723 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 FAM124AQ86V42 546 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 CREBRFQ8IUR6 639 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 RNF34Q969K3 372 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 ERLEC1Q96DZ1 483 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 RPRD1AQ96P16 312 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 HAPLN3Q96S86 360 aa14.92□□□□□ -0.02
SMARCE1-213ENST00000578044 NEUROG2Q9H2A3 272 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms