RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 SPAG6O75602 509 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CD2BP2O95400 341 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ACSL3O95573 720 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TNFP01375 233 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TPH1P17752 444 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 EN2P19622 333 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TGM2P21980 687 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CASP1P29466 404 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ALDH4A1P30038 563 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MAT2AP31153 395 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 RFC1P35251 1148 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CHI3L1P36222 383 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 BMPR1AP36894 532 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CLK2P49760 499 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MAPK10P53779 464 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 GJA9P57773 515 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 AP2B1P63010 937 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MRPS15P82914 257 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 EXOSC10Q01780 885 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CSTF1Q05048 431 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC20A2Q08357 652 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 FGL2Q14314 439 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF268Q14587 947 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MINDY4Q4G0A6 757 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ZC3H12AQ5D1E8 599 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SH3D19Q5HYK7 790 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 VARS2Q5ST30 1063 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TTC39BQ5VTQ0 682 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SDHAF4Q5VUM1 108 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ZDHHC20Q5W0Z9 365 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 LRRC8EQ6NSJ5 796 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 KLHL24Q6TFL4 600 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF720Q7Z2F6 126 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 GRASPQ7Z6J2 395 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ECHDC2Q86YB7 292 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 NUDCD3Q8IVD9 361 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC44A2Q8IWA5 706 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CMTR2Q8IYT2 770 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MAFAQ8NHW3 353 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 RFWD2Q8NHY2 731 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 FAR1Q8WVX9 515 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 WNT8BQ93098 351 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM125Q96AQ2 219 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 LENG1Q96BZ8 264 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CELF6Q96J87 481 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 DPYSL5Q9BPU6 564 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 P2RY13Q9BPV8 354 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 OSBPL10Q9BXB5 764 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 NIFKQ9BYG3 293 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 OSBPL8Q9BZF1 889 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PRKD2Q9BZL6 878 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CDH19Q9H159 772 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CDT1Q9H211 546 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CALCOCO1Q9P1Z2 691 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 HECAQ9UBI9 543 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CTNNAL1Q9UBT7 734 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 FAF1Q9UNN5 650 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SNX24Q9Y343 169 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PCDHA11Q9Y5I1 949 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PCDHAC2Q9Y5I4 1007 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 A0A1W2PRU2 124 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 CASKO14936 926 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 RAD51BO15315 384 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TPD52L2O43399 206 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 KERAO60938 352 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 IFNA14P01570 189 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 GSNP06396 782 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 UCHL3P15374 230 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 RPL17P18621 184 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 OXTRP30559 389 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 NTSP30990 170 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PCK1P35558 622 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PIK3CGP48736 1102 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 NUP107P57740 925 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PPARDQ03181 441 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 BTKQ06187 659 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TAF13Q15543 124 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 PKN1Q16512 942 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SMTNL2Q2TAL5 461 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TJAP1Q5JTD0 557 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 BTNL9Q6UXG8 535 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 RBM43Q6ZSC3 357 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SV2AQ7L0J3 742 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MYCBPAPQ8TBZ2 947 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 GPR152Q8TDT2 470 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SH3RF2Q8TEC5 729 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 KAT2BQ92831 832 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 MYCBPQ99417 103 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 VAT1Q99536 393 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 HEPHQ9BQS7 1158 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ADI1Q9BV57 179 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC39A8Q9C0K1 460 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 GANQ9H2C0 597 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM60Q9H2L4 133 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 ASB8Q9H765 288 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM153AQ9UHL3 310 aa2.99□□□□□ -1.93
SMCHD1-203ENST00000577880 TRHDEQ9UKU6 1024 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms