RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SOX2P48431 317 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 PRKAA2P54646 552 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 LMOD3Q0VAK6 560 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 MAPK7Q13164 816 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 GAB1Q13480 694 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 DLGAP5Q15398 846 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 SRSF7Q16629 238 aaKnown RBP eCLIP2.78□□□□□ -1.96
COPS3-213ENST00000577210 SLC4A8Q2Y0W8 1093 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 C5orf22Q49AR2 442 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TMEM119Q4V9L6 283 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 EARS2Q5JPH6 523 aaKnown RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 WDR45BQ5MNZ6 344 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 INTS11Q5TA45 600 aaKnown RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 PXDC1Q5TGL8 231 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 WDR78Q5VTH9 848 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TMEM268Q5VZI3 342 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 ATG16L1Q676U5 607 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 NEK8Q86SG6 692 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TMEM200AQ86VY9 491 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RHPN2Q8IUC4 686 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 ADGRF4Q8IZF3 695 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 ADGRF3Q8IZF5 1079 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TSPYL6Q8N831 410 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 NAXEQ8NCW5 288 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TNIP2Q8NFZ5 429 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 CSGALNACT1Q8TDX6 532 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 HERVK_113Q902F9 699 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 ATP2A3Q93084 1043 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 MCRS1Q96EZ8 462 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RBM17Q96I25 401 aaKnown RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 FRG2BQ96QU4 278 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TWNKQ96RR1 684 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 REEP2Q9BRK0 252 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TMEM79Q9BSE2 394 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.78□□□□□ -1.96
COPS3-213ENST00000577210 PLEKHA2Q9HB19 425 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RNF146Q9NTX7 359 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 ALKBH4Q9NXW9 302 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 MTMR4Q9NYA4 1195 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 TERF2IPQ9NYB0 399 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RRN3Q9NYV6 651 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 CNOT7Q9UIV1 285 aaKnown RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 TBX20Q9UMR3 447 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 DNAJC16Q9Y2G8 782 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 PKP3Q9Y446 797 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 SLC4A4Q9Y6R1 1079 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 ZNF804BA4D1E1 1349 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 VWA3AA6NCI4 1184 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 GAGE12JA6NER3 117 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TTC36A6NLP5 189 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 B9A039 149 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TSPAN4O14817 238 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 RBMXL2O75526 392 aaKnown RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 CD53P19397 219 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 KELP23276 732 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 PRKCHP24723 683 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 HOXA7P31268 230 aaPredicted RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 IDUAP35475 653 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 GJC1P36383 396 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 MMP13P45452 471 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 CYP2J2P51589 502 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 FAM3BP58499 235 aaPredicted RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 SRSF4Q08170 494 aaKnown RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 PDCLQ13371 301 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TWIST1Q15672 202 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 PLK5Q496M5 336 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ALG10Q5BKT4 473 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ALG10BQ5I7T1 473 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ZNF484Q5JVG2 852 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 MORN5Q5VZ52 161 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 SLC18B1Q6NT16 456 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 RETSATQ6NUM9 610 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 DPY19L2P1Q6NXN4 242 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 MRPL10Q7Z7H8 261 aaKnown RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 ZNF575Q86XF7 245 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ANKRD13BQ86YJ7 626 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 DPP10Q8N608 796 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ZNF366Q8N895 744 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TEX19Q8NA77 164 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 SLC44A5Q8NCS7 719 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 IL17REQ8NFR9 667 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 OTULINQ96BN8 352 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 MASTLQ96GX5 879 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ZNF333Q96JL9 665 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 MAELQ96JY0 434 aaKnown RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 PPM1MQ96MI6 270 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TEFMQ96QE5 360 aaKnown RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 TRMOQ9BU70 441 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 PRSS22Q9GZN4 317 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 CLPBQ9H078 707 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TMX4Q9H1E5 349 aaPredicted RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 TAOK3Q9H2K8 898 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ZHX3Q9H4I2 956 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TTC12Q9H892 705 aaPredicted RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 TXNRD2Q9NNW7 524 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 ADARB2Q9NS39 739 aaKnown RBP2.77□□□□□ -1.97
COPS3-213ENST00000577210 SLC22A11Q9NSA0 550 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 THAP1Q9NVV9 213 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TMEM45AQ9NWC5 275 aa2.77□□□□□ -1.97
COPS3-213ENST00000577210 TUBA8Q9NY65 449 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms