RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 NDFIP2Q9NV92 336 aa8.57□□□□□ -1.04
NCBP3-205ENST00000575815 DTLQ9NZJ0 730 aa8.57□□□□□ -1.04
NCBP3-205ENST00000575815 SLC30A1Q9Y6M5 507 aa8.57□□□□□ -1.04
NCBP3-205ENST00000575815 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
NCBP3-205ENST00000575815 SCN4AP35499 1836 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 ATAD5Q96QE3 1844 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 E5RI56 91 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 IRAK2O43187 625 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 VAPBO95292 243 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 CDH5P33151 784 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 MAP1BP46821 2468 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 ALKAL1Q6UXT8 129 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 BBS2Q9BXC9 721 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 MCOLN1Q9GZU1 580 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 SCUBE2Q9NQ36 999 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 IARS2Q9NSE4 1012 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 UBA2Q9UBT2 640 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 TMEM59LQ9UK28 342 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PLA2G4CQ9UP65 541 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 GRXCR1A8MXD5 290 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 ADAM12O43184 909 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 C1RP00736 705 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 HSPA9P38646 679 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PAPOLAP51003 745 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 GEMIN4P57678 1058 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PTP4A2Q12974 167 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 GPM6BQ13491 265 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 ANKRD22Q5VYY1 191 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 SPATA22Q8NHS9 363 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PAFAH2Q99487 392 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PRMT1Q99873 361 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 IL1RAPL1Q9NZN1 696 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 ARFGEF1Q9Y6D6 1849 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 A0A0G2JND7 137 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 NDUFS3O75489 264 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 SOD2P04179 222 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 GJA8P48165 433 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 SLC25A11Q02978 314 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 FASTKD3Q14CZ7 662 aaKnown RBP8.56□□□□□ -1.04
NCBP3-205ENST00000575815 PPP2R2DQ66LE6 453 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 C4orf22Q6V702 233 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 LINC00523Q86TU6 105 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 IRGQQ8WZA9 623 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 MAML1Q92585 1016 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 CAVIN3Q969G5 261 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 HERPUD2Q9BSE4 406 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 ARHGEF38Q9NXL2 777 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 GGT7Q9UJ14 662 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 FZD10Q9ULW2 581 aa8.56□□□□□ -1.04
NCBP3-205ENST00000575815 CLGNO14967 610 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 TEX28O15482 410 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 FGF10O15520 208 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 PSMD3O43242 534 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 AGTP01019 485 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 SNRPAP09012 282 aaKnown RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 USP46P62068 366 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ZNF844Q08AG5 666 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ZNF252P-AS1Q0IIN9 211 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 TERF2Q15554 542 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 NUDCD3Q8IVD9 361 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 C12orf76Q8N812 135 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 KCTD13Q8WZ19 329 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 HDAC11Q96DB2 347 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 NPY6RQ99463 290 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ELAC1Q9H777 363 aaKnown RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 LRRC40Q9H9A6 602 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 IL23AQ9NPF7 189 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 TBC1D3BA6NDS4 549 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 FAM72CH0Y354 149 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 RFPL2O75678 378 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 MT-CYBP00156 380 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 PFKMP08237 780 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ERVK-10P10266 1014 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 TACR2P21452 398 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 MGAT3Q09327 533 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ARHGEF7Q14155 803 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 DSC3Q14574 896 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 PARP6Q2NL67 630 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 KBTBD12Q3ZCT8 623 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 FAM72AQ5TYM5 149 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 KIAA0319Q5VV43 1072 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 FAM72DQ6L9T8 149 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 GET4Q7L5D6 327 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 FAM72BQ86X60 149 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ZMIZ2Q8NF64 920 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 ELMO2Q96JJ3 720 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 CASD1Q96PB1 797 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 TMEM175Q9BSA9 504 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 UBXN6Q9BZV1 441 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 MARCOQ9UEW3 520 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 SBF1O95248 1867 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-205ENST00000575815 FOXO6A8MYZ6 492 aa8.55□□□□□ -1.04
NCBP3-205ENST00000575815 TCP11X1B4DZS4 312 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms