RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZNF653Q96CK0 615 aa13.65□□□□□ -0.22
RPAIN-216ENST00000575599 VCPIP1Q96JH7 1222 aa13.65□□□□□ -0.22
RPAIN-216ENST00000575599 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
RPAIN-216ENST00000575599 HAPLN3Q96S86 360 aa13.65□□□□□ -0.22
RPAIN-216ENST00000575599 ABHD10Q9NUJ1 306 aa13.65□□□□□ -0.22
RPAIN-216ENST00000575599 BZW2Q9Y6E2 419 aaKnown RBP13.65□□□□□ -0.22
RPAIN-216ENST00000575599 GPR179Q6PRD1 2367 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 RTN2O75298 545 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CLDN11O75508 207 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 ASLP04424 464 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 SERPING1P05155 500 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 RETP07949 1114 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 GZMAP12544 262 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 P2RY2P41231 377 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF143P52747 638 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CDH4P55283 916 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 SPEM2Q0P670 501 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 BYSLQ13895 437 aaKnown RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 PPP1R15BQ5SWA1 713 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 TFAP2DQ7Z6R9 452 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 C11orf74Q86VG3 221 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF683Q8IZ20 524 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CCDC185Q8N715 623 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CCDC112Q8NEF3 446 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 OR52K2Q8NGK3 314 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CENPIQ92674 756 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 PANX2Q96RD6 677 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 MKRN2Q9H000 416 aaKnown RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 MUC3BQ9H195 1237 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 DUSP15Q9H1R2 295 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 TMEM245Q9H330 911 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 PRDM16Q9HAZ2 1276 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 MPP6Q9NZW5 540 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CNOT8Q9UFF9 292 aaKnown RBP13.64□□□□□ -0.23
RPAIN-216ENST00000575599 ADAMTS1Q9UHI8 967 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CYP8B1Q9UNU6 501 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 ERVW-1Q9UQF0 538 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 CKAP5Q14008 2032 aa13.64□□□□□ -0.23
RPAIN-216ENST00000575599 RHOBTB1O94844 696 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 RHOCP08134 193 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-216ENST00000575599 DESP17661 470 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 ADRA1BP35368 520 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 OXCT1P55809 520 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 ECT2LQ008S8 904 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 OGDHQ02218 1023 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 SLC12A1Q13621 1099 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 MAP7D1Q3KQU3 841 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 C5orf22Q49AR2 442 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-216ENST00000575599 PMS2CLQ68D20 193 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 PLEKHA7Q6IQ23 1121 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 SCYL2Q6P3W7 929 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 TMPRSS6Q8IU80 811 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 LRRC8AQ8IWT6 810 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 TC2NQ8N9U0 490 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 ZC3H10Q96K80 434 aaKnown RBP13.63□□□□□ -0.23
RPAIN-216ENST00000575599 RPL10LQ96L21 214 aaKnown RBP13.63□□□□□ -0.23
RPAIN-216ENST00000575599 BAG1Q99933 345 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-216ENST00000575599 ARRDC1-AS1Q9H2J1 176 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 MYO1AQ9UBC5 1043 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 MBD1Q9UIS9 605 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-216ENST00000575599 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 OTOGLQ3ZCN5 2332 aa13.63□□□□□ -0.23
RPAIN-216ENST00000575599 FAM186AA6NE01 2351 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 DRGXA6NNA5 263 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF217O75362 1048 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 EPN2O95208 641 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 PSMA2P25787 234 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 DHPSP49366 369 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-216ENST00000575599 STK19P49842 368 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-216ENST00000575599 COPAP53621 1224 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 CREB5Q02930 508 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 CCDC6Q16204 474 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 RWDD4Q6NW29 188 aaKnown RBP13.62□□□□□ -0.23
RPAIN-216ENST00000575599 ARMCX6Q7L4S7 300 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 OR2T3Q8NH03 318 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 PRCCQ92733 491 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-216ENST00000575599 TRIM11Q96F44 468 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 SIPA1Q96FS4 1042 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 MYO19Q96H55 970 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 MRGPRX3Q96LB0 322 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 DNAJC7Q99615 494 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 CNPY3Q9BT09 278 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 ZYG11BQ9C0D3 744 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 PRSS16Q9NQE7 514 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 OR12D3Q9UGF7 316 aa13.62□□□□□ -0.23
RPAIN-216ENST00000575599 PLXND1Q9Y4D7 1925 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms