RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 KIAA1191Q96A73 305 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 PRR11Q96HE9 360 aaPredicted RBP5.4□□□□□ -1.54
CDC27-215ENST00000573550 SGCZQ96LD1 299 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 CCDC17Q96LX7 622 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 QTRT1Q9BXR0 403 aaKnown RBP5.4□□□□□ -1.54
CDC27-215ENST00000573550 CHST12Q9NRB3 414 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 VPS45Q9NRW7 570 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 PDRG1Q9NUG6 133 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 DDX19AQ9NUU7 478 aaKnown RBP5.4□□□□□ -1.54
CDC27-215ENST00000573550 RGL1Q9NZL6 768 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 TMOD4Q9NZQ9 345 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 MTMR6Q9Y217 621 aa5.4□□□□□ -1.54
CDC27-215ENST00000573550 CPDO75976 1380 aa5.4□□□□□ -1.55
CDC27-215ENST00000573550 C1orf167Q5SNV9 1468 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 LAMA4Q16363 1823 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 HMGB1P09429 215 aaKnown RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 CCDC192P0DO97 292 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 SFPQP23246 707 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDC27-215ENST00000573550 EEF1GP26641 437 aaKnown RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 TXNL4AP83876 142 aaKnown RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 NEXNQ0ZGT2 675 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 OS9Q13438 667 aaPredicted RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 ATP1A4Q13733 1029 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 KCNJ12Q14500 433 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 KCNB1Q14721 858 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 MFSD13AQ14CX5 517 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 MPEG1Q2M385 716 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 SUPT20HL1Q3ZLR7 823 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 FBXL16Q8N461 479 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 JAKMIP1Q96N16 626 aaKnown RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 MYD88Q99836 296 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 LLPHQ9BRT6 129 aaKnown RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 EFHD1Q9BUP0 239 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 CERS4Q9HA82 394 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 SAP30LQ9HAJ7 183 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 C9orf78Q9NZ63 289 aaPredicted RBP5.39□□□□□ -1.55
CDC27-215ENST00000573550 FZD4Q9ULV1 537 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 KIF3AQ9Y496 699 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 SH3TC1Q8TE82 1336 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 ABCA3Q99758 1704 aa5.39□□□□□ -1.55
CDC27-215ENST00000573550 MEGF6O75095 1541 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 TMEM232C9JQI7 657 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 CLIC1O00299 241 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 DHHO43323 396 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 PTMAP06454 111 aaKnown RBP5.38□□□□□ -1.55
CDC27-215ENST00000573550 IDEP14735 1019 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 RPS6KB1P23443 525 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 GJB2P29033 226 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 HSPA7P48741 367 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 DHX8Q14562 1220 aaKnown RBP5.38□□□□□ -1.55
CDC27-215ENST00000573550 SEC23BQ15437 767 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 SRSF7Q16629 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDC27-215ENST00000573550 MAPKAPK3Q16644 382 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 ARHGAP15Q53QZ3 475 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 TMTC4Q5T4D3 741 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 FAM90A2PQ658T7 463 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 ZNF626Q68DY1 528 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 NAA16Q6N069 864 aaPredicted RBP5.38□□□□□ -1.55
CDC27-215ENST00000573550 SLC18B1Q6NT16 456 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 BLOC1S2Q6QNY1 142 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 CWC27Q6UX04 472 aaKnown RBP5.38□□□□□ -1.55
CDC27-215ENST00000573550 ZNF813Q6ZN06 617 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 SRLQ86TD4 932 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 AACSQ86V21 672 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 P3H2Q8IVL5 708 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 MYRIPQ8NFW9 859 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 DEPTORQ8TB45 409 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 ZNF566Q969W8 418 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 HS6ST2Q96MM7 605 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDC27-215ENST00000573550 ZSCAN16Q9H4T2 348 aaPredicted RBP5.38□□□□□ -1.55
CDC27-215ENST00000573550 USP29Q9HBJ7 922 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 GPR108Q9NPR9 543 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 SEMA5BQ9P283 1151 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 CNPY2Q9Y2B0 182 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 PCDHGB2Q9Y5G2 931 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 ZNF804BA4D1E1 1349 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 WDR17Q8IZU2 1322 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 MYH7P12883 1935 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 TNS2Q63HR2 1409 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 TNS3Q68CZ2 1445 aa5.38□□□□□ -1.55
CDC27-215ENST00000573550 LRP5O75197 1615 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 LRP6O75581 1613 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 CICQ96RK0 1608 aaPredicted RBP5.37□□□□□ -1.55
CDC27-215ENST00000573550 ARAP2Q8WZ64 1704 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 UQCRHLA0A096LP55 91 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 SMIM35A0A1B0GVV1 85 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 INO80B-WBP1J3KQ70 363 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 CTAGE5O15320 804 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 UQCRHP07919 91 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 TMIGD3P0DMS9 266 aaPredicted RBP5.37□□□□□ -1.55
CDC27-215ENST00000573550 KELP23276 732 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 GALNSP34059 522 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 DGKQP52824 942 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 RAE1P78406 368 aaKnown RBP5.37□□□□□ -1.55
CDC27-215ENST00000573550 CCDC15Q0P6D6 951 aa5.37□□□□□ -1.55
CDC27-215ENST00000573550 ST3GAL1Q11201 340 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms